BLASTX nr result

ID: Atractylodes21_contig00047153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047153
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                               140   8e-32
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   135   3e-30
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         135   5e-30
emb|CCH50954.1| T1.2 [Malus x robusta]                                124   8e-27
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   123   1e-26

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/126 (55%), Positives = 93/126 (73%), Gaps = 1/126 (0%)
 Frame = -3

Query: 379 GESGT*WLTMSYSKLPRCLKR-GE*VRDLGVRLYKNNGDA*SCSKYQGIKLLRHTMELWE 203
           GE+G  WLT  ++++ +  K   E      V +YKN GD  +C  Y+GIKL+ HTM+LWE
Sbjct: 592 GETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWE 651

Query: 202 RVIEARVRRETRVMENQFGFMPGRSTTEAIHLLRCLIEKYHEHNKDLHMLLTNLEKAYNS 23
           RVIE R+R+ETRV +NQFGFMPGRST EAI+LLR L+E+Y +  KDLHM+  +LEKAY+ 
Sbjct: 652 RVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDR 711

Query: 22  VPRDLI 5
           VPRD++
Sbjct: 712 VPRDIL 717


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/126 (54%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
 Frame = -3

Query: 379 GESGT*WLTMSYSKLPRCLKRGE*VRDLG-VRLYKNNGDA*SCSKYQGIKLLRHTMELWE 203
           GE+G  WL   ++++ +  K     R    V +YKN GD  +C  Y+GIKL+ HTM+LWE
Sbjct: 196 GETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWE 255

Query: 202 RVIEARVRRETRVMENQFGFMPGRSTTEAIHLLRCLIEKYHEHNKDLHMLLTNLEKAYNS 23
           RVIE R+R+ETRV +NQFGFMPGRST EAI+LLR L+E+Y +  KDLHM+  +LEKAY+ 
Sbjct: 256 RVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDR 315

Query: 22  VPRDLI 5
           V RD+I
Sbjct: 316 VSRDII 321


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  135 bits (339), Expect = 5e-30
 Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
 Frame = -3

Query: 379 GESGT*WLTMSYSKLPRCLKR-GE*VRDLGVRLYKNNGDA*SCSKYQGIKLLRHTMELWE 203
           GE    WLT  ++++ R  K  GE  +   V +YKN GD  SC  Y+GIKL+ HTM+LWE
Sbjct: 86  GEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKNKGDIQSCENYRGIKLMTHTMKLWE 145

Query: 202 RVIEARVRRETRVMENQFGFMPGRSTTEAIHLLRCLIEKYHEHNKDLHMLLTNLEKAYNS 23
           RVIE  +R+ET+V ENQFGFM GRS TEAI+LLR ++E+Y  + +DLHM+  +LEKAY+ 
Sbjct: 146 RVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNKRDLHMVFIDLEKAYDR 205

Query: 22  VPRDLI 5
           VPR+++
Sbjct: 206 VPREVL 211


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/126 (50%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
 Frame = -3

Query: 379 GESGT*WLTMSYSKLPRCLKRGE*VRDLG-VRLYKNNGDA*SCSKYQGIKLLRHTMELWE 203
           GE+G  WLT  ++++ +  K     R+   V +YKN GD  +C  Y+GIKL+ HTM+L  
Sbjct: 215 GETGITWLTDLFNRILKMKKMSNEWRNSTLVPIYKNKGDIQNCMNYRGIKLMSHTMKLLA 274

Query: 202 RVIEARVRRETRVMENQFGFMPGRSTTEAIHLLRCLIEKYHEHNKDLHMLLTNLEKAYNS 23
           RVIE R+R++TRV +NQF FMPG ST EAI+LLR L+EKY +   DLHM+  +LEK Y+ 
Sbjct: 275 RVIEHRLRQKTRVSDNQFKFMPGCSTMEAIYLLRKLMEKYRDGKNDLHMVFIDLEKVYDR 334

Query: 22  VPRDLI 5
           VPRD++
Sbjct: 335 VPRDIL 340


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/126 (48%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
 Frame = -3

Query: 379 GESGT*WLTMSYSKLPRCLKRG-E*VRDLGVRLYKNNGDA*SCSKYQGIKLLRHTMELWE 203
           G+ GT WL   ++++ R  K   E  R   + + KN GD  +C+ Y+GIKL+ HTM+LWE
Sbjct: 174 GDRGTVWLANLFNEIIRTKKMSDEWRRSTLIPIDKNKGDIQNCANYRGIKLMSHTMKLWE 233

Query: 202 RVIEARVRRETRVMENQFGFMPGRSTTEAIHLLRCLIEKYHEHNKDLHMLLTNLEKAYNS 23
           RVI+ R+R+ET V +NQFGFM GRST EAI+LL+ ++E+Y    KDLH++  +LEK Y+ 
Sbjct: 234 RVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKKDLHLVFFDLEKGYDR 293

Query: 22  VPRDLI 5
           VPR+++
Sbjct: 294 VPREIL 299


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