BLASTX nr result

ID: Atractylodes21_contig00047125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047125
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus c...    74   2e-11

>ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081995|gb|AEY81187.1| orf49 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 161

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/66 (66%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
 Frame = -3

Query: 241 KPHH*NSSANPFLSHRAERTFGTSVGR-----AL***LLSGRRKATSI*KTAGNSIGSPL 77
           +PHH N SANPFLSHRAERTFG    R     A     L GRRKATSI KTAGN  GSPL
Sbjct: 89  RPHHLNLSANPFLSHRAERTFGWYFSRAGCLIAASFFRLVGRRKATSIYKTAGNLRGSPL 148

Query: 76  GAFAGN 59
            AFAGN
Sbjct: 149 EAFAGN 154


Top