BLASTX nr result

ID: Atractylodes21_contig00047120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047120
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545713.1| PREDICTED: uncharacterized protein LOC100775...   226   1e-57
ref|XP_003548662.1| PREDICTED: uncharacterized protein LOC100800...   224   7e-57
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   223   1e-56
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   221   6e-56
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   220   1e-55

>ref|XP_003545713.1| PREDICTED: uncharacterized protein LOC100775347, partial [Glycine
            max]
          Length = 1071

 Score =  226 bits (577), Expect = 1e-57
 Identities = 102/139 (73%), Positives = 122/139 (87%)
 Frame = -2

Query: 417  PTEIPPGLPPKRSIQHKIDLIPGSALPNKPAYRTNPQETIEIRKQVDKLLENGLIRESLS 238
            P EIPPGLPP R I+H+IDL+PG++LPN+PAYRTNPQET EI  QV +LLE G ++ESLS
Sbjct: 653  PKEIPPGLPPLRGIEHQIDLVPGASLPNRPAYRTNPQETKEIESQVKELLEKGWVQESLS 712

Query: 237  PCAVPTLLVPKKNGEWRMCMDSRSINMITIKYRFPIPRLNDLLDELHGSTVFSKVDLRSG 58
            PCAVP LLVPKK+G WRMC+D R+IN IT+KYR PIPRL+DLLDELHG+ +FSK+DL+SG
Sbjct: 713  PCAVPVLLVPKKDGTWRMCIDCRAINNITVKYRHPIPRLDDLLDELHGANIFSKIDLKSG 772

Query: 57   YHQIRIYAGDEWKTAFKTK 1
            YHQI++  GDEWKTAFKTK
Sbjct: 773  YHQIKMKKGDEWKTAFKTK 791


>ref|XP_003548662.1| PREDICTED: uncharacterized protein LOC100800169, partial [Glycine
           max]
          Length = 973

 Score =  224 bits (570), Expect = 7e-57
 Identities = 102/139 (73%), Positives = 120/139 (86%)
 Frame = -2

Query: 417 PTEIPPGLPPKRSIQHKIDLIPGSALPNKPAYRTNPQETIEIRKQVDKLLENGLIRESLS 238
           P EIPP LPP R I+H+IDL+PG++LPN+PAYRTNPQET EI  QV +LLE G ++ESLS
Sbjct: 555 PKEIPPRLPPLRGIEHQIDLVPGASLPNRPAYRTNPQETKEIESQVKELLEKGWVQESLS 614

Query: 237 PCAVPTLLVPKKNGEWRMCMDSRSINMITIKYRFPIPRLNDLLDELHGSTVFSKVDLRSG 58
           PCAVP LLVPKK+G WRMC D R+IN IT+KYR PIPRL+DLLDELHG+ +FSK+DL+SG
Sbjct: 615 PCAVPVLLVPKKDGTWRMCTDCRAINNITVKYRHPIPRLDDLLDELHGANIFSKIDLKSG 674

Query: 57  YHQIRIYAGDEWKTAFKTK 1
           YHQIR+  GDEWKTAFKTK
Sbjct: 675 YHQIRMKKGDEWKTAFKTK 693


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  223 bits (568), Expect = 1e-56
 Identities = 100/139 (71%), Positives = 122/139 (87%)
 Frame = -2

Query: 417  PTEIPPGLPPKRSIQHKIDLIPGSALPNKPAYRTNPQETIEIRKQVDKLLENGLIRESLS 238
            P E+P GLPP R I+H+IDLIPG++LPN+PAYRTNP E  EI++QVD+LL+ G I+ESLS
Sbjct: 636  PEELPKGLPPIRGIEHQIDLIPGASLPNRPAYRTNPDEAKEIQRQVDELLQAGFIQESLS 695

Query: 237  PCAVPTLLVPKKNGEWRMCMDSRSINMITIKYRFPIPRLNDLLDELHGSTVFSKVDLRSG 58
            PCAVP LLVPKK+G WRMC+D R+IN IT+KYR+PIPRL+D+LDELHG+ +FSK+DLR G
Sbjct: 696  PCAVPVLLVPKKDGTWRMCVDCRAINNITVKYRYPIPRLDDMLDELHGAKIFSKIDLRRG 755

Query: 57   YHQIRIYAGDEWKTAFKTK 1
            YHQIR+  GDEWKTAFKTK
Sbjct: 756  YHQIRMQKGDEWKTAFKTK 774


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  221 bits (562), Expect = 6e-56
 Identities = 101/139 (72%), Positives = 121/139 (87%)
 Frame = -2

Query: 417  PTEIPPGLPPKRSIQHKIDLIPGSALPNKPAYRTNPQETIEIRKQVDKLLENGLIRESLS 238
            P E+PPGLPP R I+H+IDLIPG++LPN+  YRTNP+ET EI++QV +LL+ G +RESLS
Sbjct: 693  PKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRESLS 752

Query: 237  PCAVPTLLVPKKNGEWRMCMDSRSINMITIKYRFPIPRLNDLLDELHGSTVFSKVDLRSG 58
            PCAVP +LVPKK+G WRMC+D R+IN ITI+YR PIPRL+D+LDEL GS VFSKVDLRSG
Sbjct: 753  PCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVFSKVDLRSG 812

Query: 57   YHQIRIYAGDEWKTAFKTK 1
            YHQIR+  GDEWKTAFKTK
Sbjct: 813  YHQIRMKLGDEWKTAFKTK 831


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  220 bits (560), Expect = 1e-55
 Identities = 100/139 (71%), Positives = 121/139 (87%)
 Frame = -2

Query: 417  PTEIPPGLPPKRSIQHKIDLIPGSALPNKPAYRTNPQETIEIRKQVDKLLENGLIRESLS 238
            P E+PPGLPP R I+H+IDLIPG++LPN+  YRTNP+ET EI++QV +LL+ G +RESLS
Sbjct: 721  PKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLS 780

Query: 237  PCAVPTLLVPKKNGEWRMCMDSRSINMITIKYRFPIPRLNDLLDELHGSTVFSKVDLRSG 58
            PC+VP LLVPKK+G WRMC+D R+IN ITI+YR PIPRL+D+LDEL GS VFSK+DLRSG
Sbjct: 781  PCSVPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSG 840

Query: 57   YHQIRIYAGDEWKTAFKTK 1
            YHQIR+  GDEWKTAFKTK
Sbjct: 841  YHQIRMKLGDEWKTAFKTK 859


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