BLASTX nr result

ID: Atractylodes21_contig00047110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047110
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    85   1e-14
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    81   2e-13
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    77   3e-12
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    76   5e-12
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    75   8e-12

>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 47/185 (25%), Positives = 90/185 (48%)
 Frame = +2

Query: 35  RVQTRLDSHDEQLTTLSAQMKDLTSMVFSMKESVDRVLANQEKAQGKKQTHDDFFFDSAI 214
           +++ ++ + +E++ TL   + ++ +     KE+ +++++    ++ K       + +S  
Sbjct: 5   KMEAKVTALEEKIATLEVSLHEMQNQ---NKENQEKIISLLNSSKEKNVGESSHYNESV- 60

Query: 215 HEPPEPIITDAPPSGSNFHPPPIREHHFDSSLFSLPKVKLPSFEGVDPRGWITKAELYFQ 394
                         G+      + +   D    S+ KV+L  F G DP GWI +AE+YF 
Sbjct: 61  --------------GNKKKNSELHDEALDEFRLSVKKVELLMFNGDDPAGWIARAEVYFN 106

Query: 395 VNQISVAQKLRLAQMCMDGVALNWFTNLMVKHPQTTWNQFKDKLMVRFSGTKFRNAYEAL 574
           V   +   K+ LAQ+CMDG  +++F  L+ ++   TW   KD L+ R+ G    N +E L
Sbjct: 107 VQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENETLTWEDLKDALLERYGGVSDGNVFEQL 166

Query: 575 GSLFQ 589
            +L Q
Sbjct: 167 SALQQ 171


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 36/89 (40%), Positives = 54/89 (60%)
 Frame = +2

Query: 323 KVKLPSFEGVDPRGWITKAELYFQVNQISVAQKLRLAQMCMDGVALNWFTNLMVKHPQTT 502
           KVKLP F+G DP  WIT+AE+YF V   S   +++LA++ M+G  ++WF  LM    + +
Sbjct: 73  KVKLPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELS 132

Query: 503 WNQFKDKLMVRFSGTKFRNAYEALGSLFQ 589
           W   K  L+ R+ G +  N +E L +L Q
Sbjct: 133 WENLKRALIARYGGRRLENPFEELSTLRQ 161


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 36/103 (34%), Positives = 58/103 (56%)
 Frame = +2

Query: 281 IREHHFDSSLFSLPKVKLPSFEGVDPRGWITKAELYFQVNQISVAQKLRLAQMCMDGVAL 460
           + E   + S  S  KVKLP FEG D   WIT+ E+YF V   +   +++LA++ M+G  +
Sbjct: 42  VGESSQEESRLSGKKVKLPLFEGDDLVAWITRVEIYFDVQNTTDKMRVKLARLSMEGSTI 101

Query: 461 NWFTNLMVKHPQTTWNQFKDKLMVRFSGTKFRNAYEALGSLFQ 589
           +WF  LM    + +W + K  L+ R+ G +  N +E L ++ Q
Sbjct: 102 HWFNLLMETEDELSWEKLKRALIARYGGRRLENPFEELSTIRQ 144


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
 Frame = +2

Query: 275  PPIREHHFDSSL----FSLPKVKLPSFEGVDPRGWITKAELYFQVNQISVAQKLRLAQMC 442
            P +RE + +SS      +  KVKLP FEG DP  WIT+AE+YF V       +++L+++ 
Sbjct: 726  PLVREEYVESSQNESRLAGKKVKLPLFEGDDPVAWITRAEIYFDVQNTPDDMRVKLSRLS 785

Query: 443  MDGVALNWFTNLMVKHPQTTWNQFKDKLMVRFSGTKFRNAYEALGSLFQ 589
            M+G  ++WF  LM      +  + K  L+ R+ G +  N +E L +L Q
Sbjct: 786  MEGPTIHWFNLLMETEDDLSREKLKKALIARYDGRRLENPFEELSTLRQ 834


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 37/89 (41%), Positives = 54/89 (60%)
 Frame = +2

Query: 323 KVKLPSFEGVDPRGWITKAELYFQVNQISVAQKLRLAQMCMDGVALNWFTNLMVKHPQTT 502
           K+KLP FEG +P GWI +AE YF +N I V  +L+ A +C++G AL WF     + P  +
Sbjct: 107 KLKLPVFEGENPDGWIFRAERYFDINNIPVVDRLKAASVCLEGDALAWFQWEEGRRPFRS 166

Query: 503 WNQFKDKLMVRFSGTKFRNAYEALGSLFQ 589
           W  FK+ L+V F  T+    ++ L +L Q
Sbjct: 167 WVDFKESLIVCFRSTQEGTLHDQLLALKQ 195


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