BLASTX nr result

ID: Atractylodes21_contig00047105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047105
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14948.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S...    83   3e-14
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13

>emb|CBI14948.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 32/38 (84%), Positives = 38/38 (100%)
 Frame = +1

Query: 1   CHDATKMISKVYNREIIVRDRTRFHHFKDGSCSCNDYW 114
           CH+ATK++SKV+NREI+VRDRTRFHHFK+GSCSCNDYW
Sbjct: 364 CHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 401


>ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
           gi|241939236|gb|EES12381.1| hypothetical protein
           SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +1

Query: 1   CHDATKMISKVYNREIIVRDRTRFHHFKDGSCSCNDYW 114
           CH ATK+ISKVYNREI+VRDR RFHHFKDG+CSCNDYW
Sbjct: 656 CHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693


>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 32/38 (84%), Positives = 38/38 (100%)
 Frame = +1

Query: 1   CHDATKMISKVYNREIIVRDRTRFHHFKDGSCSCNDYW 114
           CH+ATK++SKV+NREI+VRDRTRFHHFK+GSCSCNDYW
Sbjct: 661 CHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698


>ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = +1

Query: 1   CHDATKMISKVYNREIIVRDRTRFHHFKDGSCSCNDYW 114
           CH ATK+ISKVYNREIIVRDR RFHHFKDG CSCNDYW
Sbjct: 708 CHSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +1

Query: 1   CHDATKMISKVYNREIIVRDRTRFHHFKDGSCSCNDYW 114
           CH ATK+ISK++NREII RDR RFHHFKDGSCSCNDYW
Sbjct: 697 CHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734


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