BLASTX nr result

ID: Atractylodes21_contig00047099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047099
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235061.1| uncharacterized protein LOC100306695 [Glycin...    74   2e-11
ref|XP_002320479.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
gb|AFS33549.1| ribosomal protein L30 family protein [Nicotiana t...    73   3e-11
ref|XP_002525322.1| structural constituent of ribosome, putative...    73   3e-11
ref|XP_002302864.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11

>ref|NP_001235061.1| uncharacterized protein LOC100306695 [Glycine max]
           gi|255629303|gb|ACU14996.1| unknown [Glycine max]
          Length = 107

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/47 (72%), Positives = 41/47 (87%)
 Frame = -3

Query: 360 GMLQQVKRLVVIETEEMFKARKENQEKHCALRPPLVVSHRPALASDS 220
           GMLQQVKRLVVIETEEM+KARK+ +E H ALRPPLV+SH+P   +D+
Sbjct: 60  GMLQQVKRLVVIETEEMYKARKQKEEAHRALRPPLVISHKPPSVTDA 106


>ref|XP_002320479.1| predicted protein [Populus trichocarpa] gi|222861252|gb|EEE98794.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = -3

Query: 360 GMLQQVKRLVVIETEEMFKARKENQEKHCALRPPLVVSHRPALAS 226
           GMLQQVKRLVVIETEEM+KARK+N+  H ALRPPLV++H PA AS
Sbjct: 60  GMLQQVKRLVVIETEEMYKARKQNEANHQALRPPLVINHLPASAS 104


>gb|AFS33549.1| ribosomal protein L30 family protein [Nicotiana tabacum]
          Length = 108

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/49 (75%), Positives = 40/49 (81%)
 Frame = -3

Query: 360 GMLQQVKRLVVIETEEMFKARKENQEKHCALRPPLVVSHRPALASDSTQ 214
           GMLQQVKRLVVIETEEM+KARKE    H ALRPPLVV+H  A A+DS Q
Sbjct: 60  GMLQQVKRLVVIETEEMYKARKEKLSDHKALRPPLVVNHHAAPAADSVQ 108


>ref|XP_002525322.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223535381|gb|EEF37055.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 107

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/48 (75%), Positives = 40/48 (83%)
 Frame = -3

Query: 360 GMLQQVKRLVVIETEEMFKARKENQEKHCALRPPLVVSHRPALASDST 217
           GMLQQVKRLV IETEEM+KARKEN+ KH ALR PLV+ H PA AS S+
Sbjct: 60  GMLQQVKRLVAIETEEMYKARKENEAKHRALRSPLVIKHLPAEASSSS 107


>ref|XP_002302864.1| predicted protein [Populus trichocarpa] gi|222844590|gb|EEE82137.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = -3

Query: 360 GMLQQVKRLVVIETEEMFKARKENQEKHCALRPPLVVSHRPALASDS 220
           GMLQQVKRLVVIETEEM+KARK+N   H A+RPPLV++H PA AS S
Sbjct: 60  GMLQQVKRLVVIETEEMYKARKQNDVNHRAVRPPLVINHLPASASSS 106


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