BLASTX nr result

ID: Atractylodes21_contig00047095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047095
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   148   4e-34
ref|XP_004158894.1| PREDICTED: LOW QUALITY PROTEIN: isocitrate d...   146   2e-33
ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] re...   145   3e-33
emb|CAA74776.1| NAD-dependent isocitrate dehydrogenase [Nicotian...   142   2e-32
ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus ...   139   2e-31

>ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Cucumis sativus]
          Length = 381

 Score =  148 bits (374), Expect = 4e-34
 Identities = 81/130 (62%), Positives = 92/130 (70%), Gaps = 13/130 (10%)
 Frame = -3

Query: 353 MAQRTAPILKKFLSGT-----PSHLRSCL--------RSITYMPRPGKDGSRPVTPITGE 213
           MA+R+ PILK+ LS +     P+ L SC         RS+TYMPRPG            +
Sbjct: 1   MARRSLPILKQLLSKSSSSENPALLSSCFKSSIDAQSRSVTYMPRPG------------D 48

Query: 212 GIPRPVTLIPGDGIGPLVTGAVEQVIDAMRAPVSFEKFEVHGDMNMVPDEVMDSIKKNKV 33
           G PR VTLIPGDGIGPLVTGAVEQV+DAM APV FEKFE+HGDM  VP EV+DSIKKNKV
Sbjct: 49  GAPRAVTLIPGDGIGPLVTGAVEQVMDAMHAPVYFEKFEIHGDMKKVPQEVIDSIKKNKV 108

Query: 32  CLKGGLITPV 3
           CLKGGL+TPV
Sbjct: 109 CLKGGLVTPV 118


>ref|XP_004158894.1| PREDICTED: LOW QUALITY PROTEIN: isocitrate dehydrogenase [NAD]
           regulatory subunit 1, mitochondrial-like [Cucumis
           sativus]
          Length = 272

 Score =  146 bits (368), Expect = 2e-33
 Identities = 80/130 (61%), Positives = 91/130 (70%), Gaps = 13/130 (10%)
 Frame = -3

Query: 353 MAQRTAPILKKFLSGT-----PSHLRSCL--------RSITYMPRPGKDGSRPVTPITGE 213
           MA+R+ PILK+ LS +     P+ L SC         RS+TYMPRPG            +
Sbjct: 1   MARRSLPILKQLLSKSSSSENPALLSSCFKSSIDAQSRSVTYMPRPG------------D 48

Query: 212 GIPRPVTLIPGDGIGPLVTGAVEQVIDAMRAPVSFEKFEVHGDMNMVPDEVMDSIKKNKV 33
           G PR VTLIPGDGIGPLVTGAVEQV+DAM APV FEKFE+HGDM  VP EV+DSIK NKV
Sbjct: 49  GAPRAVTLIPGDGIGPLVTGAVEQVMDAMHAPVYFEKFEIHGDMKKVPQEVIDSIKXNKV 108

Query: 32  CLKGGLITPV 3
           CLKGGL+TPV
Sbjct: 109 CLKGGLVTPV 118


>ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
           mitochondrial-like [Vitis vinifera]
          Length = 375

 Score =  145 bits (366), Expect = 3e-33
 Identities = 76/124 (61%), Positives = 91/124 (73%), Gaps = 7/124 (5%)
 Frame = -3

Query: 353 MAQRTAPILKKFLSGTPSHLRSCL-------RSITYMPRPGKDGSRPVTPITGEGIPRPV 195
           MA RT PILK+ LS + S+  + +       RS+TYMPRPG            +G PRPV
Sbjct: 1   MAPRTLPILKQLLSKSSSYNTNFIGSRFAPKRSVTYMPRPG------------DGAPRPV 48

Query: 194 TLIPGDGIGPLVTGAVEQVIDAMRAPVSFEKFEVHGDMNMVPDEVMDSIKKNKVCLKGGL 15
           TLIPGDGIGPLVTGAVEQV+DAM APV FE++EVHGDM  VP+EV++SI+KNKVCLKGGL
Sbjct: 49  TLIPGDGIGPLVTGAVEQVMDAMHAPVYFERYEVHGDMKKVPEEVLESIRKNKVCLKGGL 108

Query: 14  ITPV 3
            TP+
Sbjct: 109 ATPM 112


>emb|CAA74776.1| NAD-dependent isocitrate dehydrogenase [Nicotiana tabacum]
          Length = 371

 Score =  142 bits (359), Expect = 2e-32
 Identities = 75/120 (62%), Positives = 87/120 (72%), Gaps = 3/120 (2%)
 Frame = -3

Query: 353 MAQRTAPILKKFLSGTP---SHLRSCLRSITYMPRPGKDGSRPVTPITGEGIPRPVTLIP 183
           MA+RT P+L+  LS      SH  +  RS+TYMPRPG            +G PR VTLIP
Sbjct: 1   MAKRTLPLLRHLLSSPSHGFSHSLTSTRSVTYMPRPG------------DGTPRAVTLIP 48

Query: 182 GDGIGPLVTGAVEQVIDAMRAPVSFEKFEVHGDMNMVPDEVMDSIKKNKVCLKGGLITPV 3
           GDGIGPLVTGAVEQV+DAM APV FE+++VHGDM  VP EVM+SI+KNKVCLKGGL TPV
Sbjct: 49  GDGIGPLVTGAVEQVMDAMHAPVYFERYDVHGDMKSVPPEVMESIRKNKVCLKGGLKTPV 108


>ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223531764|gb|EEF33583.1| isocitrate dehydrogenase,
           putative [Ricinus communis]
          Length = 372

 Score =  139 bits (351), Expect = 2e-31
 Identities = 78/122 (63%), Positives = 89/122 (72%), Gaps = 5/122 (4%)
 Frame = -3

Query: 353 MAQRTAPILKKFLSG-----TPSHLRSCLRSITYMPRPGKDGSRPVTPITGEGIPRPVTL 189
           MA+R+ PILKK LS      T S L S  RS+TYMPRPG            +G PR VTL
Sbjct: 1   MARRSIPILKKLLSSSNNESTCSRLVS-RRSVTYMPRPG------------DGAPRGVTL 47

Query: 188 IPGDGIGPLVTGAVEQVIDAMRAPVSFEKFEVHGDMNMVPDEVMDSIKKNKVCLKGGLIT 9
           IPGDGIGPLVTGAVEQV++AM APV FE++EVHGDM  VP EV++SIKKNKVCLKGGL T
Sbjct: 48  IPGDGIGPLVTGAVEQVMEAMHAPVYFERYEVHGDMKKVPAEVIESIKKNKVCLKGGLAT 107

Query: 8   PV 3
           P+
Sbjct: 108 PM 109


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