BLASTX nr result

ID: Atractylodes21_contig00047067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047067
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]    80   2e-13
emb|CAN75186.1| hypothetical protein VITISV_001913 [Vitis vinifera]    76   3e-12
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...    70   2e-10
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]                69   3e-10
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]    69   3e-10

>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/94 (50%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
 Frame = -3

Query: 289 LAFAST-NSSHSKFNPKAMSCVFIGYPQGMEAYELLNLQIKHVFCSRDVVFHEAVFPFIK 113
           L +AST N SH+KF P A+  VF+GYP G +AY+LLNL     F SRDV+FHE++FPF  
Sbjct: 395 LCYASTLNHSHTKFPPHAIKAVFLGYPPGYKAYKLLNLSTNTTFISRDVIFHESIFPFQN 454

Query: 112 -SSVPGHMDVRPTDPFQQLVLP----VSSTDVPN 26
             S P H D      F  LVLP    +SS D  N
Sbjct: 455 DDSQPCHSDF-----FSDLVLPLPISISSNDSTN 483


>emb|CAN75186.1| hypothetical protein VITISV_001913 [Vitis vinifera]
          Length = 746

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 41/97 (42%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
 Frame = -3

Query: 289 LAFASTNSSH-SKFNPKAMSCVFIGYPQGMEAYELLNLQIKHVFCSRDVVFHEAVFPFIK 113
           LAFAST ++H +KF P++  CV +GYP G++ Y L ++  K +F S+D +FHE +FPF  
Sbjct: 253 LAFASTLTAHRTKFQPRSRVCVLLGYPPGIKGYRLYDVVTKQIFISQDAIFHEEIFPF-H 311

Query: 112 SSVPGHMDVRPTDPFQQLVLPVSSTD-VPNNESMAWS 5
           ++ P  +D +  DPF  LVLP+SS +  P ++S+ ++
Sbjct: 312 TATP--LD-KLIDPFPNLVLPISSLEPSPISQSIVYA 345


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
 Frame = -3

Query: 289 LAFASTN-SSHSKFNPKAMSCVFIGYPQGMEAYELLNLQIKHVFCSRDVVFHEAVFPFIK 113
           L +AST+     KF+P+A +C FIGYP G + Y+LL+L+   +  SR VVFHE +FPF+ 
Sbjct: 633 LCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELFPFLG 692

Query: 112 SSVPGH-----MDVRPTDPFQQ 62
           S +         D+ PT P Q+
Sbjct: 693 SDLSQEEQNFFPDLNPTPPMQR 714


>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
          Length = 1436

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/104 (34%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
 Frame = -3

Query: 289  LAFASTN-SSHSKFNPKAMSCVFIGYPQGMEAYELLNLQIKHVFCSRDVVFHEAVFPFIK 113
            L + ST+  S +KF+P+A +C+F+GYP G + Y+LL+++   V  SR V+F+E +FPF  
Sbjct: 785  LCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISRHVIFYEDIFPFAS 844

Query: 112  SSVPG-------HMDVRPTDPFQQLVLPVSSTDVPNNESMAWSL 2
            S++         H+ +   +  + L L  SS+D P+N   + S+
Sbjct: 845  SNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPHNHDESSSM 888


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = -3

Query: 289 LAFAST-NSSHSKFNPKAMSCVFIGYPQGMEAYELLNLQIKHVFCSRDVVFHEAVFPFIK 113
           L + ST  ++ +KF+P+A + VF+GYP G + Y+LL+++ + +  SR+V+FHE +FPF K
Sbjct: 582 LCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIETRSISISRNVIFHEEIFPFSK 641

Query: 112 SSVPGHMDVRPTDPFQQLVLPVSSTDVPNNESM 14
           ++     D+  +D F   VLP  + D   + S+
Sbjct: 642 TNPCSSPDI-SSDLFHDRVLPCIAADNDQSSSV 673


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