BLASTX nr result

ID: Atractylodes21_contig00047058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047058
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...    72   5e-11
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...    72   5e-11
ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819...    64   1e-08
ref|XP_002462006.1| hypothetical protein SORBIDRAFT_02g012435 [S...    63   2e-08
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 5/68 (7%)
 Frame = -2

Query: 192 CEDMMKQNQSIVVAFHKQSERQRNEDRIRLNASIDVARFLLNNALPFHGHDESE-----G 28
           CED+M+Q QSI  A HKQ++  +N+ RI LNASIDV+R LL+  LPF GHDESE     G
Sbjct: 187 CEDLMRQGQSIKHALHKQTDVVKNDYRIWLNASIDVSRHLLHQGLPFRGHDESEESTNKG 246

Query: 27  LFLETFRF 4
            F+E  ++
Sbjct: 247 NFVELLKY 254


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 5/68 (7%)
 Frame = -2

Query: 192 CEDMMKQNQSIVVAFHKQSERQRNEDRIRLNASIDVARFLLNNALPFHGHDESE-----G 28
           CED+M+Q QSI  A HKQ++  +N+ RI LNASIDV+R LL+  LPF GHDESE     G
Sbjct: 145 CEDLMRQGQSIKHALHKQTDVVKNDYRIWLNASIDVSRHLLHQGLPFRGHDESEESTNKG 204

Query: 27  LFLETFRF 4
            F+E  ++
Sbjct: 205 NFVELLKY 212


>ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819269 [Glycine max]
          Length = 557

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/69 (50%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
 Frame = -2

Query: 192 CEDMMKQNQSIVVAFHKQSERQRNEDRIRLNASIDVARFLLNNALPFHGHDES-----EG 28
           C+D+M QNQ I V   KQS++ R+  R RL ASID  RFLL     F GHDES     +G
Sbjct: 121 CQDLMNQNQHIEVVISKQSKQVRDLYRRRLTASIDCIRFLLKQGFAFRGHDESTNSANQG 180

Query: 27  LFLETFRFI 1
            FLE  RF+
Sbjct: 181 NFLELLRFL 189


>ref|XP_002462006.1| hypothetical protein SORBIDRAFT_02g012435 [Sorghum bicolor]
           gi|241925383|gb|EER98527.1| hypothetical protein
           SORBIDRAFT_02g012435 [Sorghum bicolor]
          Length = 406

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = -2

Query: 192 CEDMMKQNQSIVVAFHKQSERQRNEDRIRLNASIDVARFLLNNALPFHGHDESEG 28
           C+ ++++NQ IVV  H+QSE  +     RLN SID AR LL   LPFHG DES+G
Sbjct: 142 CDALLQRNQHIVVVLHRQSEAAKRAYFTRLNGSIDTARLLLKQGLPFHGRDESKG 196


>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
 Frame = -2

Query: 192 CEDMMKQNQSIVVAFHKQSERQRNEDRIRLNASIDVARFLLNNALPFHGHDESE-----G 28
           CE++M + QSI+    +Q+ + +++ R RLNASI+ ARFLL+  LPF GHDE E     G
Sbjct: 163 CENLMNEKQSIMTLLSEQTVKSQSDYRTRLNASIECARFLLHQGLPFRGHDECECSSNQG 222

Query: 27  LFLETFRFI 1
            +LE   F+
Sbjct: 223 NYLELLHFL 231


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