BLASTX nr result

ID: Atractylodes21_contig00047055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047055
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   127   1e-27
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   125   3e-27
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot...   124   6e-27
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   120   2e-25

>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/86 (77%), Positives = 68/86 (79%)
 Frame = -2

Query: 258 LQSITLLYTLLRQGFGGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVTLVALCEXXXXX 79
           LQSITLLYTLL QGF GKPMV+KAIIVTPTSLVSNWEAEIKKWVGERV LVALCE     
Sbjct: 221 LQSITLLYTLLHQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDD 280

Query: 78  XXXXXXXXXSPHSQLQVLIVSYETFR 1
                    SPHS LQVLIVSYETFR
Sbjct: 281 VVFGIDSFTSPHSPLQVLIVSYETFR 306


>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 934

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/86 (77%), Positives = 68/86 (79%)
 Frame = -2

Query: 258 LQSITLLYTLLRQGFGGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVTLVALCEXXXXX 79
           LQSITLLYTLLRQGF GK MV+KAIIVTPTSLVSNWEAEIKKWVGERV LVALCE     
Sbjct: 221 LQSITLLYTLLRQGFDGKAMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDD 280

Query: 78  XXXXXXXXXSPHSQLQVLIVSYETFR 1
                    SPHS LQVLIVSYETFR
Sbjct: 281 VVFGIDSFTSPHSPLQVLIVSYETFR 306


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/86 (77%), Positives = 68/86 (79%)
 Frame = -2

Query: 258 LQSITLLYTLLRQGFGGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVTLVALCEXXXXX 79
           LQSITLLYTLLRQGF GK MV+KAIIVTPTSLVSNWEAEIKKWVGERV LVALCE     
Sbjct: 215 LQSITLLYTLLRQGFDGKAMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDD 274

Query: 78  XXXXXXXXXSPHSQLQVLIVSYETFR 1
                    SPHS LQVLIVSYETFR
Sbjct: 275 VVFGIDSFTSPHSPLQVLIVSYETFR 300


>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
           max]
          Length = 894

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/86 (77%), Positives = 67/86 (77%)
 Frame = -2

Query: 258 LQSITLLYTLLRQGFGGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVTLVALCEXXXXX 79
           LQSITLLYTLL QGF GKPMVRKAIIVTPTSLVSNWEAEIKKWVGERV LVALCE     
Sbjct: 207 LQSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVPLVALCESTRED 266

Query: 78  XXXXXXXXXSPHSQLQVLIVSYETFR 1
                    SP S LQVLIVSYETFR
Sbjct: 267 VISGIDNFTSPKSNLQVLIVSYETFR 292


>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
           sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
           repair and recombination protein RAD54-like [Cucumis
           sativus]
          Length = 928

 Score =  120 bits (300), Expect = 2e-25
 Identities = 62/86 (72%), Positives = 66/86 (76%)
 Frame = -2

Query: 258 LQSITLLYTLLRQGFGGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVTLVALCEXXXXX 79
           LQSI+LLYTLL QGF GKPMV+KAIIVTPTSLVSNWEAEIKKWVGERV L+ALCE     
Sbjct: 220 LQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSRED 279

Query: 78  XXXXXXXXXSPHSQLQVLIVSYETFR 1
                     P S LQVLI+SYETFR
Sbjct: 280 VVSSIDSFVHPKSSLQVLIISYETFR 305


Top