BLASTX nr result

ID: Atractylodes21_contig00047054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00047054
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    65   6e-09
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    63   3e-08
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    62   6e-08
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...    59   3e-07
gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncat...    59   3e-07

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = -3

Query: 291  PPNSDGGGSNQSRNRGFRSLTRTEWEERRRKGLCFCCGLLFGPN-HTCPEADLRVMLLAD 115
            P     GG    R +G RS+   E  ERR KGLCF CG  + P  H CPE  LRV++L +
Sbjct: 908  PYGKKHGGDRVERWKGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGE 967

Query: 114  DEIISDNGEILCLES 70
             E +++ GEI+ LE+
Sbjct: 968  GEGVNEEGEIVSLET 982


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -3

Query: 249 RGFRSLTRTEWEERRRKGLCFCCGLLFGPN-HTCPEADLRVMLLADDEIISDNGEILCLE 73
           +G RS+   E  ERR KGLCF CG  + P  H CPE  LRV++L + E ++D GEI+ +E
Sbjct: 297 KGVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCPERALRVLILGEGEALNDEGEIMAME 356

Query: 72  S 70
           +
Sbjct: 357 A 357


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/65 (44%), Positives = 41/65 (63%)
 Frame = -3

Query: 255 RNRGFRSLTRTEWEERRRKGLCFCCGLLFGPNHTCPEADLRVMLLADDEIISDNGEILCL 76
           R+R F  L+  E  ER++KGLCF CG  F P H CP+  LRV++L +DE     G++L +
Sbjct: 92  RDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKLLAV 151

Query: 75  ESDHD 61
           E D +
Sbjct: 152 EVDDE 156


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/75 (42%), Positives = 44/75 (58%)
 Frame = -3

Query: 255 RNRGFRSLTRTEWEERRRKGLCFCCGLLFGPNHTCPEADLRVMLLADDEIISDNGEILCL 76
           R++  RSL+  E  +RR+KGLCF CG  + P H CP+ +L VM+L DD    D  E+  L
Sbjct: 43  RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDS--EDENEVRVL 100

Query: 75  ESDHDVSTRGSGTQV 31
            +D DV T     Q+
Sbjct: 101 -NDEDVDTGAEELQL 114


>gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/75 (42%), Positives = 44/75 (58%)
 Frame = -3

Query: 255 RNRGFRSLTRTEWEERRRKGLCFCCGLLFGPNHTCPEADLRVMLLADDEIISDNGEILCL 76
           R++  RSL+  E  +RR+KGLCF CG  + P H CP+ +L VM+L DD    D  E+  L
Sbjct: 43  RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDS--EDENEVRVL 100

Query: 75  ESDHDVSTRGSGTQV 31
            +D DV T     Q+
Sbjct: 101 -NDEDVDTGAEELQL 114


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