BLASTX nr result

ID: Atractylodes21_contig00046996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046996
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149898.1| PREDICTED: glutamate receptor 2.7-like [Cucu...    62   6e-08
gb|AFW73810.1| hypothetical protein ZEAMMB73_119256 [Zea mays]         62   6e-08
ref|XP_002331676.1| glutamate-gated kainate-type ion channel rec...    59   3e-07
ref|XP_002452948.1| hypothetical protein SORBIDRAFT_04g035400 [S...    59   4e-07
ref|XP_004169420.1| PREDICTED: glutamate receptor 2.2-like [Cucu...    57   2e-06

>ref|XP_004149898.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
          Length = 736

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
 Frame = -3

Query: 240 GSFLKEFIKQKYNSSGTNPLPLKSIEEFKDAL----SNGSVNAIYDELPYIELFLAKYGS 73
           GSF+++++K K   S T      S EE+K+AL    SNG V AI+DELPYI++FL KY S
Sbjct: 523 GSFVEDYLK-KLGFSETQLKSYGSPEEYKEALEKGTSNGGVAAIFDELPYIKVFLGKYPS 581

Query: 72  DSYKKFGPINQESGIAF 22
             ++  GP+ +  G  F
Sbjct: 582 GRFQTIGPVYKNDGFGF 598


>gb|AFW73810.1| hypothetical protein ZEAMMB73_119256 [Zea mays]
          Length = 1003

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
 Frame = -3

Query: 222 FIKQKYNSSGTNPLPLKSI---EEFKDALSNGSVNAIYDELPYIELFLAKYGSDSYKKFG 52
           FIKQ+    G +   ++S    EE+ DALS+G V A++DE+PY++LFL++Y  D Y  +G
Sbjct: 718 FIKQRLQKQGFDETKMRSYSTAEEYADALSSGRVAAVFDEIPYLKLFLSQY-CDGYTMYG 776

Query: 51  PINQESGIAFV 19
           P+ +  G  FV
Sbjct: 777 PVYKADGFGFV 787


>ref|XP_002331676.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222874095|gb|EEF11226.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 748

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
 Frame = -3

Query: 237 SFLKEFIKQKYNSSGTNPLPLKSIEEFKDALS----NGSVNAIYDELPYIELFL-AKYGS 73
           SF+K+F+K++   + T      + EE+ DALS    NG V AI+DE+PY+  FL  KY  
Sbjct: 657 SFVKDFLKKELLFNDTMLREYSTPEEYHDALSRGSHNGGVAAIFDEIPYVRRFLNDKYRC 716

Query: 72  DSYKKFGPINQESGIAFVSLSLSL 1
             ++  GP  Q  G  FVS SLSL
Sbjct: 717 SKFQMVGPTYQTDGFGFVSDSLSL 740


>ref|XP_002452948.1| hypothetical protein SORBIDRAFT_04g035400 [Sorghum bicolor]
           gi|241932779|gb|EES05924.1| hypothetical protein
           SORBIDRAFT_04g035400 [Sorghum bicolor]
          Length = 1004

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
 Frame = -3

Query: 222 FIKQKYNSSGTNPLPLKSI---EEFKDALSNGSVNAIYDELPYIELFLAKYGSDSYKKFG 52
           FIKQ+    G +   +KS    E++ DALS+G V A++DE+PY++LFL++Y  D Y   G
Sbjct: 716 FIKQQLQKLGFDEAKMKSYSTAEKYADALSSGQVAAVFDEIPYLKLFLSQY-CDGYTMVG 774

Query: 51  PINQESGIAFV 19
           P+ +  G  FV
Sbjct: 775 PVYKTDGFGFV 785


>ref|XP_004169420.1| PREDICTED: glutamate receptor 2.2-like [Cucumis sativus]
          Length = 829

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
 Frame = -3

Query: 240 GSFLKEFIKQKYNSSGTNPLPLKSIEEFKDALSNGSVN----AIYDELPYIELFLAKYGS 73
           GSF K  + ++   + +      ++EEF  ALS GS N    AI+DE+PY+++FL KYGS
Sbjct: 616 GSFTKSMLIEQLKFNESKLKSYANVEEFHKALSKGSQNGGVAAIFDEIPYLKVFLTKYGS 675

Query: 72  DSYKKFGPINQESGIAF 22
           D + + GPI +  G  F
Sbjct: 676 D-FIRAGPIYRTDGFGF 691


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