BLASTX nr result

ID: Atractylodes21_contig00046990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046990
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267511.2| PREDICTED: ABC transporter G family member 2...   175   8e-42
ref|XP_002300394.1| white-brown-complex ABC transporter family [...   172   4e-41
emb|CAN73913.1| hypothetical protein VITISV_035231 [Vitis vinifera]   169   4e-40
ref|XP_002522797.1| ATP-binding cassette transporter, putative [...   167   2e-39
ref|XP_002884953.1| abc transporter family protein [Arabidopsis ...   158   1e-36

>ref|XP_002267511.2| PREDICTED: ABC transporter G family member 26-like [Vitis vinifera]
           gi|296089962|emb|CBI39781.3| unnamed protein product
           [Vitis vinifera]
          Length = 686

 Score =  175 bits (443), Expect = 8e-42
 Identities = 91/149 (61%), Positives = 115/149 (77%)
 Frame = +3

Query: 231 MDSGRQDEIEDXXXXXXXXXXXXXQITGNNGFNHNIDFMAQAYLRNRSSSQIDIQDDTFC 410
           MD G+QDEIE               I G+NGF HNIDFM+QAY+RNR+S +IDI+DD+F 
Sbjct: 1   MDMGKQDEIE--AMALSPPSMSSMHIAGSNGFGHNIDFMSQAYIRNRNS-EIDIEDDSFR 57

Query: 411 SIKDRPLPIFLKFEDIQFKVKMSKSTPGNPMKAVMSKVVSQSNTQQDDYKQILKGITGSI 590
           + +D PLPIFLKFED+++ V+ + +   NP+KAV+S+V SQ + +QD+YK+ILKGITGSI
Sbjct: 58  THQDHPLPIFLKFEDVEYGVR-NNAASRNPVKAVVSRVASQLSMEQDNYKRILKGITGSI 116

Query: 591 GPGEILALMGPSRSGKTTLLKVIGGRLRE 677
           GPGEIL LMGPS SGKTTLLK+IGGRL E
Sbjct: 117 GPGEILGLMGPSGSGKTTLLKIIGGRLHE 145


>ref|XP_002300394.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222847652|gb|EEE85199.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 672

 Score =  172 bits (437), Expect = 4e-41
 Identities = 85/125 (68%), Positives = 103/125 (82%)
 Frame = +3

Query: 303 QITGNNGFNHNIDFMAQAYLRNRSSSQIDIQDDTFCSIKDRPLPIFLKFEDIQFKVKMSK 482
           QI G+NGF H+IDFM++AYLRNR S  IDI++D     KDRPLPIFLKFED+++KV+ SK
Sbjct: 2   QIAGSNGFGHSIDFMSEAYLRNRYSG-IDIEEDCLAMNKDRPLPIFLKFEDVEYKVRNSK 60

Query: 483 STPGNPMKAVMSKVVSQSNTQQDDYKQILKGITGSIGPGEILALMGPSRSGKTTLLKVIG 662
           ++  NP+KAV+SKV SQ N   D+YK ILKG+TGS+ PGEILALMGPS SGKTTLLK+IG
Sbjct: 61  ASSANPVKAVVSKVASQLNLDHDNYKMILKGVTGSVCPGEILALMGPSGSGKTTLLKIIG 120

Query: 663 GRLRE 677
           GRL E
Sbjct: 121 GRLSE 125


>emb|CAN73913.1| hypothetical protein VITISV_035231 [Vitis vinifera]
          Length = 665

 Score =  169 bits (429), Expect = 4e-40
 Identities = 84/124 (67%), Positives = 106/124 (85%)
 Frame = +3

Query: 306 ITGNNGFNHNIDFMAQAYLRNRSSSQIDIQDDTFCSIKDRPLPIFLKFEDIQFKVKMSKS 485
           I G+NGF HNIDFM+QAYLRNR+S +IDI+DD+F + +D PLPIFLKFED+++ V+ + +
Sbjct: 3   IAGSNGFGHNIDFMSQAYLRNRNS-EIDIEDDSFXTHQDHPLPIFLKFEDVEYGVR-NNA 60

Query: 486 TPGNPMKAVMSKVVSQSNTQQDDYKQILKGITGSIGPGEILALMGPSRSGKTTLLKVIGG 665
              NP+KAV+S+V SQ + +QD+YK+ILKGITGSIGPGEIL LMGPS SGKTTLLK+IGG
Sbjct: 61  ASRNPVKAVVSRVASQLSMEQDNYKRILKGITGSIGPGEILGLMGPSGSGKTTLLKIIGG 120

Query: 666 RLRE 677
           RL E
Sbjct: 121 RLHE 124


>ref|XP_002522797.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223538035|gb|EEF39648.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 687

 Score =  167 bits (422), Expect = 2e-39
 Identities = 86/149 (57%), Positives = 115/149 (77%)
 Frame = +3

Query: 231 MDSGRQDEIEDXXXXXXXXXXXXXQITGNNGFNHNIDFMAQAYLRNRSSSQIDIQDDTFC 410
           M+  ++DEIED              I G++GF H+I++M+QAYLRNR S  IDI++ +  
Sbjct: 1   MEIRKEDEIEDMSVLSPPTMRSM-HIAGSSGFGHSIEYMSQAYLRNRYSG-IDIEEYSLN 58

Query: 411 SIKDRPLPIFLKFEDIQFKVKMSKSTPGNPMKAVMSKVVSQSNTQQDDYKQILKGITGSI 590
             +DRPLPIFLKFED++++V+ S+++  NP+KAV+SKV SQ + +QD+YK+ILKGITGSI
Sbjct: 59  MNQDRPLPIFLKFEDVEYRVRNSQASSANPVKAVVSKVASQLHLEQDNYKKILKGITGSI 118

Query: 591 GPGEILALMGPSRSGKTTLLKVIGGRLRE 677
           GPGEILALMGPS SGKTTLLK+IGGRL +
Sbjct: 119 GPGEILALMGPSGSGKTTLLKIIGGRLTD 147


>ref|XP_002884953.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330793|gb|EFH61212.1| abc transporter family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 685

 Score =  158 bits (399), Expect = 1e-36
 Identities = 78/127 (61%), Positives = 102/127 (80%), Gaps = 2/127 (1%)
 Frame = +3

Query: 303 QITGNNGFNHNIDFMAQAYLRNRSSSQIDIQDDTFCS--IKDRPLPIFLKFEDIQFKVKM 476
           QITG+NG  HN++FM QAYLRN+ SS+IDI ++   S  ++D PLPIFLKFED+++KV+ 
Sbjct: 17  QITGSNGIVHNMEFMPQAYLRNQYSSEIDIDEEFVSSYPLEDAPLPIFLKFEDVEYKVRN 76

Query: 477 SKSTPGNPMKAVMSKVVSQSNTQQDDYKQILKGITGSIGPGEILALMGPSRSGKTTLLKV 656
           S+++  N +K ++SKVV+ +N   D YK ILKGITGS GPGEILALMGPS SGKTTLLK+
Sbjct: 77  SQASSANLVKTMVSKVVTHTNPDPDGYKHILKGITGSTGPGEILALMGPSGSGKTTLLKI 136

Query: 657 IGGRLRE 677
           +GGRL +
Sbjct: 137 MGGRLTD 143


Top