BLASTX nr result

ID: Atractylodes21_contig00046894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046894
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534848.1| PREDICTED: nuclear transcription factor Y su...   177   8e-43
ref|XP_002330366.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_002516901.1| ccaat-binding transcription factor subunit A...   175   3e-42
gb|AFK36846.1| unknown [Medicago truncatula]                          174   5e-42
ref|XP_003518964.1| PREDICTED: nuclear transcription factor Y su...   174   9e-42

>ref|XP_003534848.1| PREDICTED: nuclear transcription factor Y subunit B-5-like [Glycine
           max]
          Length = 160

 Score =  177 bits (449), Expect = 8e-43
 Identities = 83/111 (74%), Positives = 96/111 (86%)
 Frame = -3

Query: 348 KLMDDSTNRFTTGDDETANQQERLLPIANVGRIMKQILPQNAKISKEAKETMQECASEFI 169
           K M+DS    ++ D+    +Q+RLLPIANVGR+MKQILPQNAKISKEAKETMQEC SEFI
Sbjct: 16  KSMEDSIGGSSSNDNNIIKEQDRLLPIANVGRLMKQILPQNAKISKEAKETMQECVSEFI 75

Query: 168 SFVTGEASEKCKKERRKTVNGDDVCWAMGTLGFDDYAPPLKKYLDRYREVE 16
           SFVT EASEKC+KERRKTVNGDD+CWA+ TLGFDDYA P+++YL RYREVE
Sbjct: 76  SFVTSEASEKCRKERRKTVNGDDICWALATLGFDDYAEPMRRYLHRYREVE 126


>ref|XP_002330366.1| predicted protein [Populus trichocarpa] gi|222871570|gb|EEF08701.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  177 bits (448), Expect = 1e-42
 Identities = 87/114 (76%), Positives = 97/114 (85%), Gaps = 1/114 (0%)
 Frame = -3

Query: 342 MDDSTNRFTTGDDETAN-QQERLLPIANVGRIMKQILPQNAKISKEAKETMQECASEFIS 166
           M D+     + DD     +Q+RLLPIANVGRIMKQILP NAKISKEAKETMQECASEFIS
Sbjct: 1   MVDNVGAGASSDDGGVKLEQDRLLPIANVGRIMKQILPANAKISKEAKETMQECASEFIS 60

Query: 165 FVTGEASEKCKKERRKTVNGDDVCWAMGTLGFDDYAPPLKKYLDRYREVEDERS 4
           FVTGEASEKC+KERRKTVNGDDVCWAMG LGFDDYA PL++YL RYRE+E +R+
Sbjct: 61  FVTGEASEKCRKERRKTVNGDDVCWAMGALGFDDYAGPLRRYLQRYREIEGDRA 114


>ref|XP_002516901.1| ccaat-binding transcription factor subunit A, putative [Ricinus
           communis] gi|223543989|gb|EEF45515.1| ccaat-binding
           transcription factor subunit A, putative [Ricinus
           communis]
          Length = 158

 Score =  175 bits (444), Expect = 3e-42
 Identities = 84/113 (74%), Positives = 95/113 (84%)
 Frame = -3

Query: 342 MDDSTNRFTTGDDETANQQERLLPIANVGRIMKQILPQNAKISKEAKETMQECASEFISF 163
           MDD+     + ++     Q+RLLPIANVGRIMKQILP NAKISKEAKETMQEC SEFISF
Sbjct: 24  MDDNVGASGSNEEGGTKGQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISF 83

Query: 162 VTGEASEKCKKERRKTVNGDDVCWAMGTLGFDDYAPPLKKYLDRYREVEDERS 4
           VT EASEKC+KERRKTVNGDDVCWAMG LGFDDYA PL++YL RYRE+E +R+
Sbjct: 84  VTSEASEKCRKERRKTVNGDDVCWAMGALGFDDYAGPLRRYLQRYRELEGDRA 136


>gb|AFK36846.1| unknown [Medicago truncatula]
          Length = 129

 Score =  174 bits (442), Expect = 5e-42
 Identities = 83/117 (70%), Positives = 100/117 (85%), Gaps = 3/117 (2%)
 Frame = -3

Query: 345 LMDDSTNRFTTGDDETAN---QQERLLPIANVGRIMKQILPQNAKISKEAKETMQECASE 175
           +MD++    +  +DE      +Q+RLLPIANVGRIMKQILPQNAKISKE+KETMQEC SE
Sbjct: 1   MMDNNVGGSSFSNDENGGIIKEQDRLLPIANVGRIMKQILPQNAKISKESKETMQECVSE 60

Query: 174 FISFVTGEASEKCKKERRKTVNGDDVCWAMGTLGFDDYAPPLKKYLDRYREVEDERS 4
           FISFVT EASEKC+KERRKTVNGDD+CWA+GTLGFDDYA P+++YL RYRE+E +R+
Sbjct: 61  FISFVTSEASEKCRKERRKTVNGDDICWALGTLGFDDYAEPMRRYLHRYRELEVDRT 117


>ref|XP_003518964.1| PREDICTED: nuclear transcription factor Y subunit B-5-like [Glycine
           max]
          Length = 147

 Score =  174 bits (440), Expect = 9e-42
 Identities = 81/105 (77%), Positives = 92/105 (87%)
 Frame = -3

Query: 318 TTGDDETANQQERLLPIANVGRIMKQILPQNAKISKEAKETMQECASEFISFVTGEASEK 139
           T+  DE   +Q+RLLPIANVGRIMKQILP NAKISKEAKETMQEC SEFISFVTGEAS+K
Sbjct: 26  TSAQDEVIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDK 85

Query: 138 CKKERRKTVNGDDVCWAMGTLGFDDYAPPLKKYLDRYREVEDERS 4
           C KE+RKTVNGDD+CWA+ TLGFDDY+ PLK+YL +YRE E ER+
Sbjct: 86  CHKEKRKTVNGDDICWALATLGFDDYSEPLKRYLHKYREFEGERA 130


Top