BLASTX nr result

ID: Atractylodes21_contig00046878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046878
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB03099.1| starch branching enzyme class II, partial [Arabid...    76   3e-12
ref|XP_002879609.1| SBE2.1 [Arabidopsis lyrata subsp. lyrata] gi...    76   3e-12
ref|NP_181180.1| 1,4-alpha-glucan branching enzyme [Arabidopsis ...    76   3e-12
gb|ABO31358.1| starch branching enzyme II-1 [Malus x domestica]        75   4e-12
gb|ABO31359.1| starch branching enzyme II-2 [Malus x domestica]        75   4e-12

>gb|AAB03099.1| starch branching enzyme class II, partial [Arabidopsis thaliana]
          Length = 854

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
 Frame = +3

Query: 174 DDLKSMIDKGQELGLVVLMDIVHHHSSSNTSNGRKMFDG----YFNSGERGYPWI 326
           DDLKS+IDK  ELGLVVLMDIVH H+S NT +G  MFDG    YF+SG RGY W+
Sbjct: 392 DDLKSLIDKAHELGLVVLMDIVHSHASKNTLDGLDMFDGTDGQYFHSGSRGYHWM 446


>ref|XP_002879609.1| SBE2.1 [Arabidopsis lyrata subsp. lyrata]
           gi|297325448|gb|EFH55868.1| SBE2.1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
 Frame = +3

Query: 174 DDLKSMIDKGQELGLVVLMDIVHHHSSSNTSNGRKMFDG----YFNSGERGYPWI 326
           DDLKS+IDK  ELGLVVLMDIVH H+S NT +G  MFDG    YF+SG RGY W+
Sbjct: 369 DDLKSLIDKAHELGLVVLMDIVHSHASKNTLDGLDMFDGTDGQYFHSGSRGYHWM 423


>ref|NP_181180.1| 1,4-alpha-glucan branching enzyme [Arabidopsis thaliana]
           gi|75097945|sp|O23647.1|GLGB1_ARATH RecName:
           Full=1,4-alpha-glucan-branching enzyme 2-1,
           chloroplastic/amyloplastic; Short=AtSBE II-1; AltName:
           Full=Branching enzyme 3; Short=AtBE3; AltName:
           Full=Starch-branching enzyme 2-1; Flags: Precursor
           gi|2274862|emb|CAA04134.1| Starch branching enzyme II
           [Arabidopsis thaliana] gi|4581160|gb|AAD24644.1| starch
           branching enzyme II [Arabidopsis thaliana]
           gi|22531146|gb|AAM97077.1| unknown protein [Arabidopsis
           thaliana] gi|110742084|dbj|BAE98973.1| starch branching
           enzyme class II [Arabidopsis thaliana]
           gi|330254153|gb|AEC09247.1| 1,4-alpha-glucan branching
           enzyme [Arabidopsis thaliana]
          Length = 858

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
 Frame = +3

Query: 174 DDLKSMIDKGQELGLVVLMDIVHHHSSSNTSNGRKMFDG----YFNSGERGYPWI 326
           DDLKS+IDK  ELGLVVLMDIVH H+S NT +G  MFDG    YF+SG RGY W+
Sbjct: 396 DDLKSLIDKAHELGLVVLMDIVHSHASKNTLDGLDMFDGTDGQYFHSGSRGYHWM 450


>gb|ABO31358.1| starch branching enzyme II-1 [Malus x domestica]
          Length = 845

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/55 (65%), Positives = 43/55 (78%), Gaps = 4/55 (7%)
 Frame = +3

Query: 174 DDLKSMIDKGQELGLVVLMDIVHHHSSSNTSNGRKMFDG----YFNSGERGYPWI 326
           DDLKS+IDK  ELGL+VLMDIVH H+S+NT +G  MFDG    YF+SG RGY W+
Sbjct: 398 DDLKSLIDKAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDSHYFHSGSRGYHWM 452


>gb|ABO31359.1| starch branching enzyme II-2 [Malus x domestica]
          Length = 849

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/55 (65%), Positives = 43/55 (78%), Gaps = 4/55 (7%)
 Frame = +3

Query: 174 DDLKSMIDKGQELGLVVLMDIVHHHSSSNTSNGRKMFDG----YFNSGERGYPWI 326
           DDLKS+IDK  ELGL+VLMDIVH H+S+NT +G  MFDG    YF+SG RGY W+
Sbjct: 398 DDLKSLIDKAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDSHYFHSGSRGYHWM 452


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