BLASTX nr result

ID: Atractylodes21_contig00046863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046863
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containi...   199   4e-49
ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat...   187   1e-45
ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   185   4e-45
ref|XP_002526186.1| pentatricopeptide repeat-containing protein,...   181   6e-44
ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43

>ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
           gi|297738773|emb|CBI28018.3| unnamed protein product
           [Vitis vinifera]
          Length = 695

 Score =  199 bits (505), Expect = 4e-49
 Identities = 95/164 (57%), Positives = 127/164 (77%)
 Frame = +3

Query: 105 MHPKYKLREAVDSLYRHTHVNPQAYTRLVLDCVRLGDAHQAKRLQSHMDQNLYEPTTTFI 284
           M P  +LREA+D+LY     N ++YTRL+L CVR  D  QAKRLQ+HMD +LY+PT TF+
Sbjct: 1   MKPTPRLREAIDALYSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFL 60

Query: 285 HNRLLDVYAKSGKLLDAQNLFDKLPQRDIYTYNAMLKAYSKTGSVDDLQGLFKNMPCCDS 464
            NRLL +YAKSG L DA++LFDK+ +RD++++NAML AYSK+G+V+DL+ +F  M   D+
Sbjct: 61  QNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDA 120

Query: 465 VSYNTLIAGLASRGCEREALEVFVKMQNEGFEVTGHTYVSVLNA 596
           VSYNT+IAG +  GC  +ALE FV+MQ EGFE T +T+VSVL+A
Sbjct: 121 VSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHA 164


>ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  187 bits (475), Expect = 1e-45
 Identities = 90/164 (54%), Positives = 124/164 (75%)
 Frame = +3

Query: 105 MHPKYKLREAVDSLYRHTHVNPQAYTRLVLDCVRLGDAHQAKRLQSHMDQNLYEPTTTFI 284
           M  K  LR++VD L   +    +AYT+LVL+CVR  + +QAKRLQSHM+ +L++PT +F+
Sbjct: 1   MKAKSMLRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFL 60

Query: 285 HNRLLDVYAKSGKLLDAQNLFDKLPQRDIYTYNAMLKAYSKTGSVDDLQGLFKNMPCCDS 464
           HN+LL +YAK GKL DAQNLFDK+ +RDI+++NA+L AY+K+GS+ +L+  F  MP  DS
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDS 120

Query: 465 VSYNTLIAGLASRGCEREALEVFVKMQNEGFEVTGHTYVSVLNA 596
           VSYNT IAG +   C +E+LE+F +MQ EGFE T +T VS+LNA
Sbjct: 121 VSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNA 164



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 45/72 (62%)
 Frame = +3

Query: 381 NAMLKAYSKTGSVDDLQGLFKNMPCCDSVSYNTLIAGLASRGCEREALEVFVKMQNEGFE 560
           +A++  YSK G +DD + +F  MP  + VS+N +I G A  G +++ALE+F  M  + F+
Sbjct: 361 SALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFK 420

Query: 561 VTGHTYVSVLNA 596
               T++ +L+A
Sbjct: 421 PDNVTFIGILSA 432


>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  185 bits (470), Expect = 4e-45
 Identities = 89/164 (54%), Positives = 123/164 (75%)
 Frame = +3

Query: 105 MHPKYKLREAVDSLYRHTHVNPQAYTRLVLDCVRLGDAHQAKRLQSHMDQNLYEPTTTFI 284
           M  K  LR++VD L   +    +AYT+LVL+CVR  + +QAKRLQSHM+ +L++PT +F+
Sbjct: 1   MKAKSMLRQSVDLLCSRSTATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFL 60

Query: 285 HNRLLDVYAKSGKLLDAQNLFDKLPQRDIYTYNAMLKAYSKTGSVDDLQGLFKNMPCCDS 464
           HN+LL +YAK GKL DAQNLFDK+ +RD +++NA+L AY+K+GS+ +L+  F  MP  DS
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDS 120

Query: 465 VSYNTLIAGLASRGCEREALEVFVKMQNEGFEVTGHTYVSVLNA 596
           VSYNT IAG +   C +E+LE+F +MQ EGFE T +T VS+LNA
Sbjct: 121 VSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNA 164



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 45/72 (62%)
 Frame = +3

Query: 381 NAMLKAYSKTGSVDDLQGLFKNMPCCDSVSYNTLIAGLASRGCEREALEVFVKMQNEGFE 560
           +A++  YSK G +DD + +F  MP  + VS+N +I G A  G +++ALE+F  M  + F+
Sbjct: 361 SALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFK 420

Query: 561 VTGHTYVSVLNA 596
               T++ +L+A
Sbjct: 421 PDNVTFIGILSA 432


>ref|XP_002526186.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534490|gb|EEF36190.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 446

 Score =  181 bits (460), Expect = 6e-44
 Identities = 88/161 (54%), Positives = 118/161 (73%)
 Frame = +3

Query: 114 KYKLREAVDSLYRHTHVNPQAYTRLVLDCVRLGDAHQAKRLQSHMDQNLYEPTTTFIHNR 293
           KY+LR A+DSLY H     + YTRL L+C R  D  QAKRL++HMD +LY+P+ +F+ NR
Sbjct: 5   KYRLRRAIDSLYTHGPATHECYTRLALECFRANDVDQAKRLETHMDFHLYQPSDSFLQNR 64

Query: 294 LLDVYAKSGKLLDAQNLFDKLPQRDIYTYNAMLKAYSKTGSVDDLQGLFKNMPCCDSVSY 473
           LL +YAK GK+  A+ LFDK+  RDI+++NAML  Y+K G V+DL+ +F +MP  DSVSY
Sbjct: 65  LLHLYAKLGKISHARYLFDKMSYRDIFSWNAMLSLYAKAGLVEDLRVVFDDMPSRDSVSY 124

Query: 474 NTLIAGLASRGCEREALEVFVKMQNEGFEVTGHTYVSVLNA 596
           NT+I G A  G   +A+E FV+MQ EGF+ T +T+VSVLNA
Sbjct: 125 NTVITGFAKNGRAGKAVEAFVRMQTEGFKPTEYTHVSVLNA 165


>ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|222866452|gb|EEF03583.1|
           predicted protein [Populus trichocarpa]
          Length = 695

 Score =  179 bits (454), Expect = 3e-43
 Identities = 88/164 (53%), Positives = 122/164 (74%)
 Frame = +3

Query: 105 MHPKYKLREAVDSLYRHTHVNPQAYTRLVLDCVRLGDAHQAKRLQSHMDQNLYEPTTTFI 284
           M+ K KLR+A+D+LY +   + + YTRL L+C R  D  QAKRL+SHM  +L++P  TFI
Sbjct: 1   MNSKLKLRQAIDTLYTNGPASHECYTRLALECFRASDVDQAKRLKSHMHLHLFKPNDTFI 60

Query: 285 HNRLLDVYAKSGKLLDAQNLFDKLPQRDIYTYNAMLKAYSKTGSVDDLQGLFKNMPCCDS 464
           HNRLL++YAKSG++  A+ LFD++ QRD +++NAML  Y+K+G V+DL+ +F NMP  DS
Sbjct: 61  HNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDS 120

Query: 465 VSYNTLIAGLASRGCEREALEVFVKMQNEGFEVTGHTYVSVLNA 596
           VSYNT+I+G A  G    AL VF++MQ EG + T +T+VSVLNA
Sbjct: 121 VSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNA 164


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