BLASTX nr result

ID: Atractylodes21_contig00046859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046859
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529530.1| conserved hypothetical protein [Ricinus comm...    50   1e-09
ref|YP_004222277.1| hypothetical protein BevumaM_p039 [Beta vulg...    59   3e-07

>ref|XP_002529530.1| conserved hypothetical protein [Ricinus communis]
           gi|223531014|gb|EEF32868.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 50.4 bits (119), Expect(2) = 1e-09
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +3

Query: 27  CNSPPVAEDRVTVHTRVFQFLRKLF 101
           CNSPP+AE+R+T+HTRVFQFLRK F
Sbjct: 36  CNSPPIAEERITIHTRVFQFLRKHF 60



 Score = 37.0 bits (84), Expect(2) = 1e-09
 Identities = 19/27 (70%), Positives = 21/27 (77%)
 Frame = +2

Query: 86  LTEALSYQSSSTTAVSYLIARRVAFFI 166
           L +  SYQSSSTTAVSYLIARR   F+
Sbjct: 56  LRKHFSYQSSSTTAVSYLIARREWLFL 82


>ref|YP_004222277.1| hypothetical protein BevumaM_p039 [Beta vulgaris subsp. maritima]
           gi|346683152|ref|YP_004842084.1| hypothetical protein
           BemaM_p037 [Beta macrocarpa]
           gi|317905712|emb|CBX33240.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439792|emb|CBX33292.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148721|emb|CBJ23359.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500070|emb|CBX24886.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939198|emb|CBL52045.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 102

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/37 (81%), Positives = 31/37 (83%)
 Frame = +3

Query: 63  VHTRVFQFLRKLFLTSQVVQQLYLIL*PGGSPFSFSR 173
           VHT + QFLRKLFLTSQVVQQLYLI   GGSPF FSR
Sbjct: 66  VHTILLQFLRKLFLTSQVVQQLYLIARRGGSPFEFSR 102


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