BLASTX nr result

ID: Atractylodes21_contig00046832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046832
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510967.1| pentatricopeptide repeat-containing protein,...    86   4e-15
ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
emb|CBI38482.3| unnamed protein product [Vitis vinifera]               79   5e-13
emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]    79   5e-13
ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi...    78   9e-13

>ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550082|gb|EEF51569.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 774

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/108 (45%), Positives = 66/108 (61%)
 Frame = -2

Query: 324 MLKRSNLSSTHVLKTLKSVNKTQIYSLCTSVGNDPGNCVSGSCSESETDWVGLLKPFDIE 145
           MLK + L   HV +TL+S+   Q Y +     N   + +    SE+ET+W  LLKPFD++
Sbjct: 1   MLKGAKLM-VHVGETLQSLPSLQ-YFILGFPRNYSFSKLKDDDSENETEWERLLKPFDLK 58

Query: 144 KLRESLNRLTXXXXXXXXXXXLDVSTSLEIFNWANTQKGYCHTFDVYY 1
           +LR S N++T           LDVSTS+ IF WA +QKGYCHTFDVY+
Sbjct: 59  ELRRSFNQITPFQLCKLLLLPLDVSTSMAIFQWAGSQKGYCHTFDVYH 106


>ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|222853877|gb|EEE91424.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 51/110 (46%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
 Frame = -2

Query: 324 MLKRSNLSSTHVLKTLKSVNKTQIYSLCTS--VGNDPGNCVSGSCSESETDWVGLLKPFD 151
           MLK   L+   V KTL+   KTQ  SL  S  V    G     + S  ET+W  LLKPFD
Sbjct: 1   MLKGPKLAP--VSKTLQIFIKTQSLSLFPSGFVRKFSGFNSKDNESAHETEWERLLKPFD 58

Query: 150 IEKLRESLNRLTXXXXXXXXXXXLDVSTSLEIFNWANTQKGYCHTFDVYY 1
           +++LR S N++T           LDV TS+EIF WA  QKGYCH+F VYY
Sbjct: 59  LKELRRSFNKITPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYY 108


>emb|CBI38482.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 49/126 (38%), Positives = 62/126 (49%)
 Frame = -2

Query: 378 YGKPAFLASPIFTSNLEVMLKRSNLSSTHVLKTLKSVNKTQIYSLCTSVGNDPGNCVSGS 199
           Y     L  P FT NL+   K  + S       +      + Y+   +V N+     SG 
Sbjct: 5   YPFTVMLKIPKFTKNLQYFFKTPSFS-------ISPSGFNRFYN--DTVFNNTNGLDSG- 54

Query: 198 CSESETDWVGLLKPFDIEKLRESLNRLTXXXXXXXXXXXLDVSTSLEIFNWANTQKGYCH 19
                T+W  LLKPFD+ +LR SL R+T           LDV TS+E+F WA TQKGYCH
Sbjct: 55  -----TEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCH 109

Query: 18  TFDVYY 1
            FDVYY
Sbjct: 110 MFDVYY 115


>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 49/126 (38%), Positives = 62/126 (49%)
 Frame = -2

Query: 378 YGKPAFLASPIFTSNLEVMLKRSNLSSTHVLKTLKSVNKTQIYSLCTSVGNDPGNCVSGS 199
           Y     L  P FT NL+   K  + S       +      + Y+   +V N+     SG 
Sbjct: 5   YPFTVMLKIPKFTKNLQYFFKTPSFS-------ISPSGFNRFYN--DTVFNNTNGLDSG- 54

Query: 198 CSESETDWVGLLKPFDIEKLRESLNRLTXXXXXXXXXXXLDVSTSLEIFNWANTQKGYCH 19
                T+W  LLKPFD+ +LR SL R+T           LDV TS+E+F WA TQKGYCH
Sbjct: 55  -----TEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCH 109

Query: 18  TFDVYY 1
            FDVYY
Sbjct: 110 MFDVYY 115


>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/64 (56%), Positives = 43/64 (67%)
 Frame = -2

Query: 192 ESETDWVGLLKPFDIEKLRESLNRLTXXXXXXXXXXXLDVSTSLEIFNWANTQKGYCHTF 13
           +S T+W  LLKPFD+ +LR SL R+T           LDV TS+E+F WA TQKGYCH F
Sbjct: 70  DSGTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMF 129

Query: 12  DVYY 1
           DVYY
Sbjct: 130 DVYY 133


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