BLASTX nr result

ID: Atractylodes21_contig00046741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046741
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534949.1| conserved hypothetical protein [Ricinus comm...    80   4e-24
ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [...    94   1e-17
gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea] gi...    92   4e-17
ref|XP_002863428.1| hypothetical protein ARALYDRAFT_356389 [Arab...    48   3e-07

>ref|XP_002534949.1| conserved hypothetical protein [Ricinus communis]
           gi|223524315|gb|EEF27434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 80.5 bits (197), Expect(2) = 4e-24
 Identities = 41/60 (68%), Positives = 43/60 (71%)
 Frame = +3

Query: 78  MPSTRALLATNHSLAGRSGSAFQVRYPNRILCSTGSLTPXXXXXXXXXXXXXXXQPLAVI 257
           MPSTRALLATNHSLAGR GSAFQVRYPNR+LCSTGSL P               QPLAV+
Sbjct: 1   MPSTRALLATNHSLAGRLGSAFQVRYPNRLLCSTGSLAPSSILSTALLLGSLQLQPLAVL 60



 Score = 55.8 bits (133), Expect(2) = 4e-24
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +2

Query: 260 LLLGWLAPWVVRLSQSGLSSQPIFPGAHIKA 352
           LLLGWLAP VVRLSQSGLSS+P+FPGA +KA
Sbjct: 60  LLLGWLAPEVVRLSQSGLSSRPMFPGARVKA 90


>ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [Ricinus communis]
           gi|223533482|gb|EEF35227.1| cytochrome C oxidase,
           subunit II, putative [Ricinus communis]
          Length = 139

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/64 (70%), Positives = 51/64 (79%)
 Frame = -3

Query: 346 YVCARKDRLTAEPTLAQPHHPGCEPPEKQAITASGWSSMEPRSKAVDKIEEGVRLPVEQR 167
           ++   K R TAE TLAQPHHPGC+PP+KQ ITAS WS  EPRSKAVDKI+EG RL VEQR
Sbjct: 76  HISISKHRPTAESTLAQPHHPGCDPPKKQDITASDWSCREPRSKAVDKIKEGARLLVEQR 135

Query: 166 IRLG 155
            +LG
Sbjct: 136 RQLG 139


>gb|ABV23661.1| cytochrome oxidase subunit 2 [Boehmeria nivea]
           gi|157102084|gb|ABV23662.1| cytochrome oxidase subunit 2
           [Boehmeria nivea] gi|157102086|gb|ABV23663.1| cytochrome
           oxidase subunit 2 [Boehmeria nivea]
          Length = 310

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/52 (86%), Positives = 47/52 (90%)
 Frame = -1

Query: 366 CGTNHAFMCAPGKIG*LLSPLWLSRTTQGASHPRSKLLQRAAGAVWSRGARQ 211
           CGTNHAFM APG IG + SPLWLSRTT+GASHPRSKLLQRAAGAV SRGARQ
Sbjct: 256 CGTNHAFMRAPGNIGRVPSPLWLSRTTRGASHPRSKLLQRAAGAVGSRGARQ 307


>ref|XP_002863428.1| hypothetical protein ARALYDRAFT_356389 [Arabidopsis lyrata subsp.
           lyrata] gi|297309263|gb|EFH39687.1| hypothetical protein
           ARALYDRAFT_356389 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score = 47.8 bits (112), Expect(2) = 3e-07
 Identities = 22/25 (88%), Positives = 24/25 (96%)
 Frame = -2

Query: 311 AHSGSAAPPRVRATREASYYSERLE 237
           +HSGSAAPP V+ATREASYYSERLE
Sbjct: 232 SHSGSAAPPGVQATREASYYSERLE 256



 Score = 31.6 bits (70), Expect(2) = 3e-07
 Identities = 14/19 (73%), Positives = 14/19 (73%)
 Frame = -1

Query: 366 CGTNHAFMCAPGKIG*LLS 310
           CG NHAF  APG IG LLS
Sbjct: 214 CGNNHAFTRAPGNIGRLLS 232


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