BLASTX nr result

ID: Atractylodes21_contig00046712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046712
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    53   2e-13
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                50   1e-12
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma...    52   4e-12
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    49   2e-11
dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare]     49   7e-11

>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 52.8 bits (125), Expect(2) = 2e-13
 Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -1

Query: 307 VHDSEGDVDNDVTHQIKI*WLKWIATAEADLMCELLMCDRVI-LKLKGKFYKVVIKLTMV 131
           V    GD+D+DVTH++   W+KW        +   ++CD+ I LKLKGKFY+VV++  ++
Sbjct: 43  VIQGSGDIDDDVTHRVGAAWMKW-------RLASGVLCDKKIPLKLKGKFYRVVVRPALL 95

Query: 130 YKSQ 119
           Y ++
Sbjct: 96  YGAE 99



 Score = 47.4 bits (111), Expect(2) = 2e-13
 Identities = 22/44 (50%), Positives = 27/44 (61%)
 Frame = -2

Query: 132 CISLRKVHERKLEVTEMRMLRWTCGRTLLDRIPNEVFRV*LRVA 1
           C  ++  H  K+ V EMRMLRW CG T  D+I NEV R  + VA
Sbjct: 100 CWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVA 143


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 50.4 bits (119), Expect(2) = 1e-12
 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -1

Query: 307 VHDSEGDVDNDVTHQIKI*WLKWIATAEADLMCELLMCDRVIL-KLKGKFYKVVIKLTMV 131
           V    GD+D+DVTH++   W+KW        +   ++CD+ I  KLKGKFY+VV++  ++
Sbjct: 511 VIQGSGDIDDDVTHRVGAAWMKW-------RLASGVLCDKKISPKLKGKFYRVVVRPALL 563

Query: 130 YKSQ 119
           Y ++
Sbjct: 564 YGAE 567



 Score = 47.4 bits (111), Expect(2) = 1e-12
 Identities = 22/44 (50%), Positives = 27/44 (61%)
 Frame = -2

Query: 132 CISLRKVHERKLEVTEMRMLRWTCGRTLLDRIPNEVFRV*LRVA 1
           C  ++  H  K+ V EMRMLRW CG T  D+I NEV R  + VA
Sbjct: 568 CWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVA 611


>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
           gi|238014750|gb|ACR38410.1| unknown [Zea mays]
          Length = 215

 Score = 52.4 bits (124), Expect(3) = 4e-12
 Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -1

Query: 295 EGDVDNDVTHQIKI*WLKWIATAEADLMCELLMCD-RVILKLKGKFYKVVIKLTMVYKSQ 119
           +GD+D DV+H+IK  WLKW   A        ++CD RV  KLKGKFY+  I+  M+Y ++
Sbjct: 38  DGDIDEDVSHRIKAGWLKWRQAAG-------VLCDPRVPHKLKGKFYRTAIRPAMLYGAE 90



 Score = 41.2 bits (95), Expect(3) = 4e-12
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = -2

Query: 132 CISLRKVHERKLEVTEMRMLRWTCGRTLLDRIPNEVFRV*LRVA 1
           C   ++ H ++L V EMRMLRW CG T  DR+ N+  R  + VA
Sbjct: 91  CWPTKRRHVQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVA 134



 Score = 21.9 bits (45), Expect(3) = 4e-12
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -2

Query: 318 RYLGSMIQKE 289
           RYLGSM+QK+
Sbjct: 29  RYLGSMLQKD 38


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 49.3 bits (116), Expect(3) = 2e-11
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = -1

Query: 295 EGDVDNDVTHQIKI*WLKWIATAEADLMCELLMCD-RVILKLKGKFYKVVIKLTMVYKSQ 119
           +GD+D DV H+IK  W+KW   +        ++CD RV  KLKGKFY+  I+  ++Y ++
Sbjct: 390 DGDIDEDVNHRIKAGWMKWRQASG-------ILCDKRVPQKLKGKFYRTAIRPAILYGAE 442



 Score = 41.6 bits (96), Expect(3) = 2e-11
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -2

Query: 132 CISLRKVHERKLEVTEMRMLRWTCGRTLLDRIPNEVFR 19
           C   ++ H ++L V EMRMLRW CG T  DR+ N+  R
Sbjct: 443 CWPTKRRHVQQLGVAEMRMLRWMCGHTRRDRVRNDDIR 480



 Score = 21.9 bits (45), Expect(3) = 2e-11
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -2

Query: 318 RYLGSMIQKE 289
           RYLGSM+QK+
Sbjct: 381 RYLGSMLQKD 390


>dbj|BAJ95890.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 210

 Score = 48.9 bits (115), Expect(2) = 7e-11
 Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -1

Query: 295 EGDVDNDVTHQIKI*WLKWIATAEADLMCELLMCD-RVILKLKGKFYKVVIKLTMVYKSQ 119
           +GD+D DV H+IK  W+KW   +        ++CD RV+ KLKG+FY+  I+  ++Y ++
Sbjct: 59  DGDIDEDVGHRIKAGWMKWRQASG-------VLCDKRVLQKLKGRFYRTAIRPAILYGAE 111



 Score = 42.7 bits (99), Expect(2) = 7e-11
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = -2

Query: 132 CISLRKVHERKLEVTEMRMLRWTCGRTLLDRIPNEVFRV*LRVA 1
           C   ++ H ++L V EMRMLRW CG T  DR+ N+  R  L VA
Sbjct: 112 CWPTKRRHIQQLGVAEMRMLRWICGHTRKDRVRNDDIRERLGVA 155


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