BLASTX nr result

ID: Atractylodes21_contig00046695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046695
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...   106   2e-21
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]    94   1e-17
emb|CBI28171.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin...    89   5e-16
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin...    88   8e-16

>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536251|gb|EEF37903.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 530

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/104 (50%), Positives = 64/104 (61%)
 Frame = -3

Query: 314 PDCAFRHPPLEGLKEANGEWSNPKNGPALPVNKTNIPCYFYSNGFCNKGDRCSFLHGPAD 135
           P CAFRHPPLE   E   E S+     ++P NKTN+PCYF+ NGFCNKGDRC F+HGP  
Sbjct: 56  PTCAFRHPPLEMHAEGPPELSSS----SVPANKTNVPCYFFFNGFCNKGDRCFFMHGPEA 111

Query: 134 GSVACISSKAASAGNTAVPCKKKLSAGSSTGLAPVESHPDPSET 3
            S    S   +SA    +P   K+S G+ T  AP E + +PSET
Sbjct: 112 NSFTGKSGSTSSAIKENIPLDSKISGGNDTVSAPTEVNANPSET 155


>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
          Length = 554

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 53/127 (41%), Positives = 64/127 (50%), Gaps = 23/127 (18%)
 Frame = -3

Query: 314 PDCAFRHP-----------------------PLEGLKEANGEWSNPKNGPALPVNKTNIP 204
           P CAFRHP                       PL+G  EA+ E     +  ++PVNKTN P
Sbjct: 54  PACAFRHPVRVMLKRIQRDSRSGLLEEKVHLPLDGHIEASSEPVTLSHHSSVPVNKTNTP 113

Query: 203 CYFYSNGFCNKGDRCSFLHGPADGSVACISSKAASAGNTAVPCKKKLSAGSSTGLAPVES 24
           CYFY NGFCNKG+RCSFLHGP   + A  S K AS  N   P +    AG+ TG   +  
Sbjct: 114 CYFYYNGFCNKGERCSFLHGPDSSAPAWKSLKTASEVNDMRPPENNXIAGTETGPTLIGR 173

Query: 23  HPDPSET 3
            P+  ET
Sbjct: 174 RPNSVET 180


>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = -3

Query: 314 PDCAFRHPPLEGLKEANGEWSNPKNGPALPVNKTNIPCYFYSNGFCNKGDRCSFLHGP 141
           P CAFRHPPL+G  EA+ E     +  ++PVNKTN PCYFY NGFCNKG+RCSFLHGP
Sbjct: 54  PACAFRHPPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHGP 111


>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 526

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/92 (45%), Positives = 53/92 (57%)
 Frame = -3

Query: 314 PDCAFRHPPLEGLKEANGEWSNPKNGPALPVNKTNIPCYFYSNGFCNKGDRCSFLHGPAD 135
           P CAFRHPPL+G         +     +LP NKT +PCYF+ NGFCNKGDRCSFLHGP D
Sbjct: 54  PTCAFRHPPLDG--HTGAPVPSEPTQTSLPANKTLVPCYFFFNGFCNKGDRCSFLHGPDD 111

Query: 134 GSVACISSKAASAGNTAVPCKKKLSAGSSTGL 39
                   K  +    A+  + K  +G+ TG+
Sbjct: 112 SIFNIKPVKNENGSTDALNLENKAPSGNRTGV 143


>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 524

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/92 (48%), Positives = 55/92 (59%)
 Frame = -3

Query: 314 PDCAFRHPPLEGLKEANGEWSNPKNGPALPVNKTNIPCYFYSNGFCNKGDRCSFLHGPAD 135
           P CAFRHPPL+G   A+   S P    +LP NKT +PCYF+ NG CNKGDRCSFLHGP D
Sbjct: 54  PTCAFRHPPLDGHTGASVP-SEPTQ-TSLPANKTMVPCYFFFNGSCNKGDRCSFLHGPDD 111

Query: 134 GSVACISSKAASAGNTAVPCKKKLSAGSSTGL 39
                   K  +    A+  + K S+G+  GL
Sbjct: 112 SIFTVKPVKNDNGSTDALNLENKTSSGNRIGL 143


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