BLASTX nr result

ID: Atractylodes21_contig00046681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046681
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44
emb|CBI25911.3| unnamed protein product [Vitis vinifera]              180   9e-44
ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...   177   8e-43
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42

>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  182 bits (463), Expect = 2e-44
 Identities = 81/99 (81%), Positives = 91/99 (91%)
 Frame = +2

Query: 2   KKMKEEGYVPKTDYVLHDVEEEQKEQNLSYHSEKLAIAFAILATPPGTPVKVFKNLRTCV 181
           KK+KEEGYVP T++VLHDVEEEQKEQNL YHSEKLA+ F I++TPPGTP+KVFKNLRTCV
Sbjct: 595 KKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCV 654

Query: 182 DCHTATKFISKLVSRKIIVRDSSRFHCFEGGSCSCKDYW 298
           DCHTA K+ISK+V RKI VRDS+RFHCFE GSCSCKDYW
Sbjct: 655 DCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693


>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score =  180 bits (457), Expect = 9e-44
 Identities = 81/99 (81%), Positives = 91/99 (91%)
 Frame = +2

Query: 2   KKMKEEGYVPKTDYVLHDVEEEQKEQNLSYHSEKLAIAFAILATPPGTPVKVFKNLRTCV 181
           K+MKEEGYVP T++VLHDVEEEQKEQNLSYHSEKLA+AF I++TP GT +KVFKNLRTCV
Sbjct: 189 KRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIISTPAGTLIKVFKNLRTCV 248

Query: 182 DCHTATKFISKLVSRKIIVRDSSRFHCFEGGSCSCKDYW 298
           DCHTA KFISK+  RKIIVRDS+RFHCFE GSCSC+DYW
Sbjct: 249 DCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 287


>emb|CBI25911.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score =  180 bits (457), Expect = 9e-44
 Identities = 81/99 (81%), Positives = 91/99 (91%)
 Frame = +2

Query: 2   KKMKEEGYVPKTDYVLHDVEEEQKEQNLSYHSEKLAIAFAILATPPGTPVKVFKNLRTCV 181
           K+MKEEGYVP T++VLHDVEEEQKEQNLSYHSEKLA+AF I++TP GT +KVFKNLRTCV
Sbjct: 190 KRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIISTPAGTLIKVFKNLRTCV 249

Query: 182 DCHTATKFISKLVSRKIIVRDSSRFHCFEGGSCSCKDYW 298
           DCHTA KFISK+  RKIIVRDS+RFHCFE GSCSC+DYW
Sbjct: 250 DCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 288


>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
           gi|449484855|ref|XP_004156999.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  177 bits (449), Expect = 8e-43
 Identities = 79/99 (79%), Positives = 89/99 (89%)
 Frame = +2

Query: 2   KKMKEEGYVPKTDYVLHDVEEEQKEQNLSYHSEKLAIAFAILATPPGTPVKVFKNLRTCV 181
           K+MKE GYVP T++VLHDVE EQKE+NLSYHSEKLA+AF I++TP GTP+KVFKNLRTCV
Sbjct: 626 KRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCV 685

Query: 182 DCHTATKFISKLVSRKIIVRDSSRFHCFEGGSCSCKDYW 298
           DCH A KFIS +  RKIIVRDS+RFHCFEGGSCSCKDYW
Sbjct: 686 DCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  176 bits (445), Expect = 2e-42
 Identities = 78/99 (78%), Positives = 91/99 (91%)
 Frame = +2

Query: 2   KKMKEEGYVPKTDYVLHDVEEEQKEQNLSYHSEKLAIAFAILATPPGTPVKVFKNLRTCV 181
           K+MKEEG+VP T++VLHDVE+EQKEQNLSYHSEKLA+AF I++TP GTP+KVFKNLRTCV
Sbjct: 578 KRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCV 637

Query: 182 DCHTATKFISKLVSRKIIVRDSSRFHCFEGGSCSCKDYW 298
           DCHTA KFISK+ +RKIIVRDS+RFH FE G CSC+DYW
Sbjct: 638 DCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676


Top