BLASTX nr result

ID: Atractylodes21_contig00046678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046678
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18989.3| unnamed protein product [Vitis vinifera]              271   6e-71
ref|XP_002285873.1| PREDICTED: N-glycosylase/DNA lyase [Vitis vi...   271   6e-71
ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Rici...   263   2e-68
ref|XP_002307451.1| predicted protein [Populus trichocarpa] gi|2...   260   1e-67
gb|AAD41425.1|AC007727_14 Similar to gb|U96710 8-oxoguanine DNA-...   259   3e-67

>emb|CBI18989.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score =  271 bits (694), Expect = 6e-71
 Identities = 131/170 (77%), Positives = 147/170 (86%)
 Frame = +3

Query: 3   LGVVQGIDFYEFPSLDQLSKVSEDKLRKAGFGYRAKYITGTVEVLQSKPGGGVEWLASLR 182
           LG V G DFYEFPSLD+LS VSE+  R+AGFGYRAKYI GTV+ LQSK GGG+EWLASLR
Sbjct: 12  LGSVGGFDFYEFPSLDRLSMVSEEDFREAGFGYRAKYIIGTVKALQSKSGGGIEWLASLR 71

Query: 183 KLELQNAIEALTTLPGVGPKVAACIALFSLDQHHAVPVDTHVWKIATRYLVPELAGTRLT 362
           +++LQ  ++AL+TLPGVGPKVAACIALFSLDQHHA+PVDTHVW+IATRYL+PELAG RLT
Sbjct: 72  EMDLQEVVDALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRYLIPELAGARLT 131

Query: 363 PKLCSHVADAFVKKYGRYAGWAQTLLFIAELPSQKALLQSLTNEKEETKD 512
           PKLCS VADAFV KYG+YAGWAQTLLFIAELPSQK +L       EE KD
Sbjct: 132 PKLCSRVADAFVSKYGKYAGWAQTLLFIAELPSQKTILPPKFWAIEENKD 181


>ref|XP_002285873.1| PREDICTED: N-glycosylase/DNA lyase [Vitis vinifera]
          Length = 399

 Score =  271 bits (694), Expect = 6e-71
 Identities = 131/170 (77%), Positives = 147/170 (86%)
 Frame = +3

Query: 3   LGVVQGIDFYEFPSLDQLSKVSEDKLRKAGFGYRAKYITGTVEVLQSKPGGGVEWLASLR 182
           LG V G DFYEFPSLD+LS VSE+  R+AGFGYRAKYI GTV+ LQSK GGG+EWLASLR
Sbjct: 207 LGSVGGFDFYEFPSLDRLSMVSEEDFREAGFGYRAKYIIGTVKALQSKSGGGIEWLASLR 266

Query: 183 KLELQNAIEALTTLPGVGPKVAACIALFSLDQHHAVPVDTHVWKIATRYLVPELAGTRLT 362
           +++LQ  ++AL+TLPGVGPKVAACIALFSLDQHHA+PVDTHVW+IATRYL+PELAG RLT
Sbjct: 267 EMDLQEVVDALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRYLIPELAGARLT 326

Query: 363 PKLCSHVADAFVKKYGRYAGWAQTLLFIAELPSQKALLQSLTNEKEETKD 512
           PKLCS VADAFV KYG+YAGWAQTLLFIAELPSQK +L       EE KD
Sbjct: 327 PKLCSRVADAFVSKYGKYAGWAQTLLFIAELPSQKTILPPKFWAIEENKD 376


>ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Ricinus communis]
           gi|223540555|gb|EEF42122.1| 8-oxoguanine DNA
           glycosylase, putative [Ricinus communis]
          Length = 412

 Score =  263 bits (672), Expect = 2e-68
 Identities = 125/160 (78%), Positives = 143/160 (89%)
 Frame = +3

Query: 3   LGVVQGIDFYEFPSLDQLSKVSEDKLRKAGFGYRAKYITGTVEVLQSKPGGGVEWLASLR 182
           LG V+G +FYEFP L++L  V+E++LR AGFGYRAKYITGT++ LQ KPGGGVEWL +LR
Sbjct: 191 LGNVEGFEFYEFPDLERLGLVTEEQLRAAGFGYRAKYITGTIDALQLKPGGGVEWLTALR 250

Query: 183 KLELQNAIEALTTLPGVGPKVAACIALFSLDQHHAVPVDTHVWKIATRYLVPELAGTRLT 362
           KL+LQ  I+AL TLPGVGPKVAACIALFSLDQHHA+PVDTHVW+IATR+L+PELAG RLT
Sbjct: 251 KLDLQVVIDALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATRHLLPELAGARLT 310

Query: 363 PKLCSHVADAFVKKYGRYAGWAQTLLFIAELPSQKALLQS 482
           PKLCS VADAFV KYG+YAGWAQTLLFIAELP QK+LL S
Sbjct: 311 PKLCSRVADAFVSKYGKYAGWAQTLLFIAELPPQKSLLPS 350


>ref|XP_002307451.1| predicted protein [Populus trichocarpa] gi|222856900|gb|EEE94447.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  260 bits (665), Expect = 1e-67
 Identities = 128/179 (71%), Positives = 153/179 (85%), Gaps = 1/179 (0%)
 Frame = +3

Query: 3   LGVVQGIDFYEFPSLDQLSKVSEDKLRKAGFGYRAKYITGTVEVLQSKPGGGVEWLASLR 182
           LG V+G +F+ FPSL++L+ V+E +LR+AGFGYRAKY+TGTV  LQSKP GGV+WL SLR
Sbjct: 188 LGNVEGFEFHAFPSLERLALVTEQQLREAGFGYRAKYVTGTVNALQSKPEGGVKWLESLR 247

Query: 183 KLELQNAIEALTTLPGVGPKVAACIALFSLDQHHAVPVDTHVWKIATRYLVPELAGTRLT 362
           KL+LQ  I++L TLPG+G KVA+CIALFSLDQHHA+PVDTHVW+IAT +LVPELAG  LT
Sbjct: 248 KLQLQMVIDSLCTLPGIGLKVASCIALFSLDQHHAIPVDTHVWRIATTHLVPELAGASLT 307

Query: 363 PKLCSHVADAFVKKYGRYAGWAQTLLFIAELPSQKALLQSLT-NEKEETKDKLHKS*RG 536
           PKLC  VADAFV KYG+YAGWAQTLLFIAELPSQKALL S+T NEK+ +K +  K+ RG
Sbjct: 308 PKLCGRVADAFVTKYGKYAGWAQTLLFIAELPSQKALLPSVTVNEKKSSKKRGSKAQRG 366


>gb|AAD41425.1|AC007727_14 Similar to gb|U96710 8-oxoguanine DNA-glycosylase from Homo sapiens
           [Arabidopsis thaliana]
          Length = 391

 Score =  259 bits (662), Expect = 3e-67
 Identities = 126/175 (72%), Positives = 149/175 (85%), Gaps = 3/175 (1%)
 Frame = +3

Query: 3   LGVVQGIDFYEFPSLDQLSKVSEDKLRKAGFGYRAKYITGTVEVLQSKPGGGVEWLASLR 182
           LG + G +F++FPSLD+LS+VSE++ RKAGFGYRAKYITGTV  LQ+KPGGG EWL SLR
Sbjct: 182 LGDIDGFEFHQFPSLDRLSRVSEEEFRKAGFGYRAKYITGTVNALQAKPGGGNEWLLSLR 241

Query: 183 KLELQNAIEALTTLPGVGPKVAACIALFSLDQHHAVPVDTHVWKIATRYLVPELAGTRLT 362
           K+ELQ A+ AL TLPGVGPKVAACIALFSLDQH A+PVDTHVW+IAT YL+P+LAG +LT
Sbjct: 242 KVELQEAVAALCTLPGVGPKVAACIALFSLDQHSAIPVDTHVWQIATNYLLPDLAGAKLT 301

Query: 363 PKLCSHVADAFVKKYGRYAGWAQTLLFIAELPSQKALLQSLT---NEKEETKDKL 518
           PKL   VA+AFV KYG YAGWAQTLLFIAELP+QK LLQS +   N+ +E+ +KL
Sbjct: 302 PKLHGRVAEAFVSKYGEYAGWAQTLLFIAELPAQKTLLQSFSQPINKLDESAEKL 356


Top