BLASTX nr result

ID: Atractylodes21_contig00046674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00046674
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002881232.1| predicted protein [Arabidopsis lyrata subsp....    79   4e-13
emb|CBI28838.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...    77   1e-12
ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thalia...    76   2e-12
gb|AAC25941.1| hypothetical protein [Arabidopsis thaliana]             76   2e-12

>ref|XP_002881232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327071|gb|EFH57491.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 704

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/56 (69%), Positives = 45/56 (80%)
 Frame = -2

Query: 284 KNILASFSTDKKRPAAASIDDISPHLCFICLLHLANEHELSIVGSANLDDLSIHLS 117
           K +LASF  D +  AA +  DISPHLCFICLLHLANEH LS+VGS NLDDL+IHL+
Sbjct: 651 KELLASFPDDCQ--AAGATQDISPHLCFICLLHLANEHNLSLVGSQNLDDLTIHLA 704


>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = -2

Query: 284 KNILASFSTDKKRPAAASIDDISPHLCFICLLHLANEHELSIVGSANLDDLSIHL 120
           ++ILASF    +  AAA+++DISPHLCFICLLHLANEH LSI G A+LDDLSIHL
Sbjct: 606 RHILASFPDHSR--AAAAMEDISPHLCFICLLHLANEHGLSINGCADLDDLSIHL 658


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = -2

Query: 284 KNILASFSTDKKRPAAASIDDISPHLCFICLLHLANEHELSIVGSANLDDLSIHL 120
           ++ILASF    +  AAA+++DISPHLCFICLLHLANEH LSI G A+LDDLSIHL
Sbjct: 611 RHILASFPDHSR--AAAAMEDISPHLCFICLLHLANEHGLSINGCADLDDLSIHL 663


>ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thaliana]
           gi|75217252|sp|Q564K3.1|CND2_ARATH RecName:
           Full=Condensin complex subunit 2; AltName:
           Full=Chromosome-associated protein H; Short=AtCAP-H;
           AltName: Full=Non-SMC condensin I complex subunit H;
           AltName: Full=Protein EMBRYO DEFECTIVE 2795
           gi|62533251|dbj|BAD95575.1| chromosome associate protein
           subunit H [Arabidopsis thaliana]
           gi|330253609|gb|AEC08703.1| condensin complex subunit 2
           [Arabidopsis thaliana]
          Length = 671

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = -2

Query: 284 KNILASFSTDKKRPAAASIDDISPHLCFICLLHLANEHELSIVGSANLDDLSIHLS 117
           K +LASF  D +  AA    DISPHLCFICLLHLANEH LS++GS NLDDL+IHL+
Sbjct: 618 KVLLASFPDDCQ--AAERTQDISPHLCFICLLHLANEHNLSLIGSQNLDDLTIHLA 671


>gb|AAC25941.1| hypothetical protein [Arabidopsis thaliana]
          Length = 704

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = -2

Query: 284 KNILASFSTDKKRPAAASIDDISPHLCFICLLHLANEHELSIVGSANLDDLSIHLS 117
           K +LASF  D +  AA    DISPHLCFICLLHLANEH LS++GS NLDDL+IHL+
Sbjct: 651 KVLLASFPDDCQ--AAERTQDISPHLCFICLLHLANEHNLSLIGSQNLDDLTIHLA 704


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