BLASTX nr result
ID: Atractylodes21_contig00046647
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00046647
(590 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat... 158 3e-59
emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera] 158 3e-59
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,... 152 5e-55
ref|XP_002308767.1| predicted protein [Populus trichocarpa] gi|2... 152 9e-54
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat... 145 4e-53
>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 158 bits (399), Expect(3) = 3e-59
Identities = 69/100 (69%), Positives = 86/100 (86%)
Frame = -3
Query: 414 YSVLHRMREADIYPDVVTYNSLIAGASKHCLLSRCLDLFDEMIKMGIPPDVWSYNTLMHC 235
YSV+HRM+EA I PDV+TYNSLIA A+K CLLSR LDLF+EM++ GI PDVWSYN+LMHC
Sbjct: 62 YSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHC 121
Query: 234 LFRLGKPEEANKIFQDIVMSKISPCSTTFNTMFNGLCKNG 115
F+LGKP+EAN++FQDI+++ + P S+TFN M NGLC NG
Sbjct: 122 FFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNG 161
Score = 60.5 bits (145), Expect(3) = 3e-59
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = -2
Query: 520 MVCKLSTRLMNICVASFCKVQQLEKAEAVVVDAIRL 413
MVC+ ST+L+NIC+AS CKV QLEKAEAVV+D IRL
Sbjct: 1 MVCRFSTKLLNICIASLCKVGQLEKAEAVVIDGIRL 36
Score = 57.0 bits (136), Expect(3) = 3e-59
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = -1
Query: 110 LRAARTVLKELGESGLAPNASTYTTVMKYCFRSRQF 3
L AAR +L+ELGESG P+A TYTTVMK CFRSRQF
Sbjct: 198 LNAARRILRELGESGNVPDAITYTTVMKCCFRSRQF 233
>emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
Length = 457
Score = 158 bits (399), Expect(3) = 3e-59
Identities = 69/100 (69%), Positives = 86/100 (86%)
Frame = -3
Query: 414 YSVLHRMREADIYPDVVTYNSLIAGASKHCLLSRCLDLFDEMIKMGIPPDVWSYNTLMHC 235
YSV+HRM+EA I PDV+TYNSLIA A+K CLLSR LDLF+EM++ GI PDVWSYN+LMHC
Sbjct: 62 YSVIHRMKEAGISPDVITYNSLIAAATKRCLLSRSLDLFEEMLRTGIRPDVWSYNSLMHC 121
Query: 234 LFRLGKPEEANKIFQDIVMSKISPCSTTFNTMFNGLCKNG 115
F+LGKP+EAN++FQDI+++ + P S+TFN M NGLC NG
Sbjct: 122 FFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLCNNG 161
Score = 60.5 bits (145), Expect(3) = 3e-59
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = -2
Query: 520 MVCKLSTRLMNICVASFCKVQQLEKAEAVVVDAIRL 413
MVC+ ST+L+NIC+AS CKV QLEKAEAVV+D IRL
Sbjct: 1 MVCRFSTKLLNICIASLCKVGQLEKAEAVVIDGIRL 36
Score = 57.0 bits (136), Expect(3) = 3e-59
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = -1
Query: 110 LRAARTVLKELGESGLAPNASTYTTVMKYCFRSRQF 3
L AAR +L+ELGESG P+A TYTTVMK CFRSRQF
Sbjct: 198 LNAARRILRELGESGNVPDAITYTTVMKCCFRSRQF 233
>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 487
Score = 152 bits (383), Expect(3) = 5e-55
Identities = 70/105 (66%), Positives = 84/105 (80%)
Frame = -3
Query: 414 YSVLHRMREADIYPDVVTYNSLIAGASKHCLLSRCLDLFDEMIKMGIPPDVWSYNTLMHC 235
YS+L+RMREA I PDVVTYNSLIAGA+++CLL L+LFDEM+ MGI PDVWSYNTLMHC
Sbjct: 92 YSLLNRMREASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHC 151
Query: 234 LFRLGKPEEANKIFQDIVMSKISPCSTTFNTMFNGLCKNGLVAGS 100
F+LGK EEAN++ + I +SPC TTFN M NGLCKNG + +
Sbjct: 152 FFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNA 196
Score = 57.8 bits (138), Expect(3) = 5e-55
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1
Query: 110 LRAARTVLKELGESGLAPNASTYTTVMKYCFRSRQF 3
LRAAR++LKEL SG PNA TYTTVMK+CFRSR+F
Sbjct: 228 LRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRF 263
Score = 51.6 bits (122), Expect(3) = 5e-55
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = -2
Query: 523 RMVCKLSTRLMNICVASFCKVQQLEKAEAVVVDAIRL 413
RMV +LSTRL+NI +AS CK ++L KAE+V++D IRL
Sbjct: 30 RMVRRLSTRLLNISIASLCKAKELNKAESVIIDGIRL 66
>ref|XP_002308767.1| predicted protein [Populus trichocarpa] gi|222854743|gb|EEE92290.1|
predicted protein [Populus trichocarpa]
Length = 454
Score = 152 bits (383), Expect(3) = 9e-54
Identities = 65/102 (63%), Positives = 84/102 (82%)
Frame = -3
Query: 414 YSVLHRMREADIYPDVVTYNSLIAGASKHCLLSRCLDLFDEMIKMGIPPDVWSYNTLMHC 235
YSVL RM+EA I PD+VTYNSLIAGA +HCLLS C+DLF+EM+++GI PD+WSYNTLMHC
Sbjct: 62 YSVLDRMKEASIKPDIVTYNSLIAGAMRHCLLSNCMDLFEEMLELGIKPDIWSYNTLMHC 121
Query: 234 LFRLGKPEEANKIFQDIVMSKISPCSTTFNTMFNGLCKNGLV 109
F+L +P++A ++F DI++ +SP T+NTM NGLCK G V
Sbjct: 122 FFKLERPDDAYRVFTDIILCYLSPSQATYNTMLNGLCKCGFV 163
Score = 54.3 bits (129), Expect(3) = 9e-54
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = -1
Query: 110 LRAARTVLKELGESGLAPNASTYTTVMKYCFRSRQF 3
L+ AR +LKELG SGL PN TYTTVM+ CFRSR+F
Sbjct: 198 LKTARWMLKELGASGLVPNVITYTTVMRCCFRSRRF 233
Score = 50.8 bits (120), Expect(3) = 9e-54
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = -2
Query: 520 MVCKLSTRLMNICVASFCKVQQLEKAEAVVVDAIRL 413
MV + STR +NIC+ASFCK + L++AE V++D +RL
Sbjct: 1 MVSRSSTRFLNICIASFCKAKHLQRAETVIIDGVRL 36
>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449468117|ref|XP_004151768.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449532400|ref|XP_004173169.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
Length = 456
Score = 145 bits (366), Expect(3) = 4e-53
Identities = 65/105 (61%), Positives = 85/105 (80%)
Frame = -3
Query: 414 YSVLHRMREADIYPDVVTYNSLIAGASKHCLLSRCLDLFDEMIKMGIPPDVWSYNTLMHC 235
YSVL+RMREA I PDV+TYNSLIAGA+++ L + LDLF+EM++ GI PD+WSYNTLMHC
Sbjct: 62 YSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHC 121
Query: 234 LFRLGKPEEANKIFQDIVMSKISPCSTTFNTMFNGLCKNGLVAGS 100
F LGKP+EA ++F+DI++ +SP TFNTM NGLCK+G + +
Sbjct: 122 FFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNA 166
Score = 59.7 bits (143), Expect(3) = 4e-53
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = -2
Query: 520 MVCKLSTRLMNICVASFCKVQQLEKAEAVVVDAIRL 413
MVCK ST+ +NICVASFCK QQ++KAEAV++D IR+
Sbjct: 1 MVCKYSTKFLNICVASFCKSQQMQKAEAVIIDGIRI 36
Score = 49.7 bits (117), Expect(3) = 4e-53
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -1
Query: 110 LRAARTVLKELGESGLAPNASTYTTVMKYCFRSRQF 3
LRAA +L E +SGL PNA TYTT+MK CFRSRQ+
Sbjct: 198 LRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQY 233