BLASTX nr result

ID: Atractylodes21_contig00045997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045997
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621937.1| hypothetical protein MTR_7g025220 [Medicago ...    73   3e-11
ref|XP_003622560.1| hypothetical protein MTR_7g045430 [Medicago ...    66   3e-09
gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ...    66   3e-09
gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus v...    64   1e-08
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    64   1e-08

>ref|XP_003621937.1| hypothetical protein MTR_7g025220 [Medicago truncatula]
           gi|355496952|gb|AES78155.1| hypothetical protein
           MTR_7g025220 [Medicago truncatula]
          Length = 455

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +3

Query: 42  SVVSTGQSAQISAQLGSSSEENFTGDT-SGFTACAGTSQTKSILSSWIIDSGASEHMCSQ 218
           +++ +  S   S  L  ++E + T +T SG    A  S   S+ + WIIDSGA++H+CS 
Sbjct: 203 NLLPSASSPNTSTSLQPTAETSTTINTVSGIYFVA--SLLPSLSNVWIIDSGANDHICSS 260

Query: 219 YSMFSSLTKLIKPHKVSLPNGNTLFVEYVGTVCLTNHLILSHVLY 353
              FSS  K IKP +VSLPNG+ + VEY G V  +  L +SHVLY
Sbjct: 261 MHYFSSFYK-IKPTRVSLPNGHIVMVEYAGNVTFSPTLYISHVLY 304


>ref|XP_003622560.1| hypothetical protein MTR_7g045430 [Medicago truncatula]
           gi|355497575|gb|AES78778.1| hypothetical protein
           MTR_7g045430 [Medicago truncatula]
          Length = 483

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/103 (36%), Positives = 58/103 (56%)
 Frame = +3

Query: 45  VVSTGQSAQISAQLGSSSEENFTGDTSGFTACAGTSQTKSILSSWIIDSGASEHMCSQYS 224
           VVS    +Q ++   +S+  + +  ++G +A   +S  K+    W+IDSGA+EH+C   +
Sbjct: 305 VVSAPSPSQATSNHIASTNISTSDPSAGISASVASSTRKTPF--WLIDSGANEHICCDIA 362

Query: 225 MFSSLTKLIKPHKVSLPNGNTLFVEYVGTVCLTNHLILSHVLY 353
            FSS  + IKP  VSLPNGN +   + G V   +    SHVLY
Sbjct: 363 SFSSFYR-IKPVYVSLPNGNLVLAHFAGNVSFNSKFHFSHVLY 404


>gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 772

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/59 (50%), Positives = 43/59 (72%)
 Frame = +3

Query: 177 WIIDSGASEHMCSQYSMFSSLTKLIKPHKVSLPNGNTLFVEYVGTVCLTNHLILSHVLY 353
           W+IDSGA+EH+CS   +F S  + IKP  V+LPNG+++ V+Y GTV  + H  ++HVLY
Sbjct: 389 WLIDSGANEHICSSLHLFHSYYR-IKPICVNLPNGSSVIVQYAGTVVFSPHFHITHVLY 446


>gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus vulgaris]
          Length = 1009

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 51/149 (34%), Positives = 70/149 (46%), Gaps = 36/149 (24%)
 Frame = +3

Query: 18  LNRCIINDSVVS--------------TGQSAQISAQLGSSSEEN-------------FTG 116
           +N  +I+D V+S              T Q  Q+ + L   S  N             FT 
Sbjct: 535 VNNIVISDYVLSEPCQKEQEKGEYHLTAQQYQVLSDLFRQSTNNNTAANIQVNRVGSFTA 594

Query: 117 DTSGFTACAGTSQTKSILSS---------WIIDSGASEHMCSQYSMFSSLTKLIKPHKVS 269
           DT+     A  S T +IL+          WI+DSGA++H+CS  S F+S  K IKP  +S
Sbjct: 595 DTNH--KMAKRSPTGNILTLNNLQHGRNYWILDSGATDHVCSSLSEFTSY-KSIKPISIS 651

Query: 270 LPNGNTLFVEYVGTVCLTNHLILSHVLYV 356
           LPNG+ +F +Y GTV   +   L  VLYV
Sbjct: 652 LPNGHHVFAKYSGTVIFNHKFYLIDVLYV 680


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
 Frame = +3

Query: 66  AQISAQLGSSSEENFTGDT-------SGFTACAGTSQTKSIL--SSWIIDSGASEHMCSQ 218
           A +S    S S  +F GD+       S FT     S + S L  S WI+DSGA+ H+C+ 
Sbjct: 329 ALLSLHSSSGSSTSF-GDSNPLQQSISNFTGILSLSPSSSTLNPSIWILDSGATHHVCTN 387

Query: 219 YSMFSSLTKLIKPHKVSLPNGNTLFVEYVGTVCLTNHLILSHVLYV 356
            SMF S+      + V+LP G  + +  +GT+ L+ HL+L HVLY+
Sbjct: 388 SSMFHSIHSF-SSNTVTLPTGTKIPITGIGTIHLSPHLVLEHVLYI 432


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