BLASTX nr result

ID: Atractylodes21_contig00045976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045976
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08132.1| Putative non-LTR retroelement reverse transcripta...    64   1e-08
ref|XP_003607019.1| hypothetical protein MTR_4g071260 [Medicago ...    54   1e-05
ref|XP_003592447.1| hypothetical protein MTR_1g105030 [Medicago ...    54   1e-05

>gb|ABN08132.1| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 532

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/136 (27%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
 Frame = -3

Query: 394 VLVWRLRLGRVPVWEYLDKLGVGLH*VLGPRCEYE---VESLDHCFVRCSLILQIWENIR 224
           + VWRL   R+P  + L +  + L  V+   C YE   +ES  H F+ C +   +W +++
Sbjct: 373 LFVWRLLRNRLPTKDNLMRRRIILANVVD--CVYECGKLESATHLFLDCRIPTMVWLHVQ 430

Query: 223 HWWGLPHALGSSIEE---VLEIPSNVPSSLKKIFQVVVW*ALYIIWKNWNSLVFSNSGFA 53
           +W G+     S + E      + + +P S   +F+V+ +  +++IWK+ N+ VF+N+G  
Sbjct: 431 NWIGISTVSPSQMREHFTQFTLMAGMPRSSHSVFKVIWFAYVWVIWKDRNNRVFNNTGSN 490

Query: 52  IADLMFEVQAMSYFWI 5
            + L  +V+  S+ W+
Sbjct: 491 HSVLFEKVKLNSFLWL 506


>ref|XP_003607019.1| hypothetical protein MTR_4g071260 [Medicago truncatula]
           gi|355508074|gb|AES89216.1| hypothetical protein
           MTR_4g071260 [Medicago truncatula]
          Length = 327

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
 Frame = -3

Query: 286 ESLDHCFVRCSLILQIWENIRHWWGLPHALGSSIEE------VLEIPSNVPSSLKKIFQV 125
           E++DH F++C+   ++W  + HW G+P     S+ +       L    +V    KKI   
Sbjct: 206 ETVDHLFIQCTSFGRVWYLVCHWLGIPCVFQGSVTQHFIQFSKLACMMHVSHDYKKI--- 262

Query: 124 VVW*ALYIIWKNWNSLVFSNSGFAIADLMFEVQAMSYFWIS 2
           + W  ++ IWK  N+ VF+N       ++  V+ +S+ W+S
Sbjct: 263 IWWACVWAIWKERNNCVFNNLASDPLSVVERVKLLSFLWLS 303


>ref|XP_003592447.1| hypothetical protein MTR_1g105030 [Medicago truncatula]
           gi|355481495|gb|AES62698.1| hypothetical protein
           MTR_1g105030 [Medicago truncatula]
          Length = 335

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
 Frame = -3

Query: 391 LVWRLRLGRVP-----VWEYLDKLGVGLH*VLGPRCEYEVESLDHCFVRCSLILQIWENI 227
           L WR  L R+P     ++ +     + LH VL   C+ E ES +H F+ C+++  +WE +
Sbjct: 157 LSWRSLLNRIPTRLNLLYHHALPPNLSLHCVL---CDLEEESTNHLFLHCNVVSSVWEKV 213

Query: 226 RHWWGLPHALGSSIEEVLEIPSNVPSSLKKIFQV---VVW-*ALYIIWKNWNSLVFSNSG 59
           + W+ +      ++  V  +  N   +  K+FQ+   +VW   L++IW+  N+ +F+N  
Sbjct: 214 KRWFEIEFITPPNL-FVHWLCWNAGRTTSKLFQMGRRLVWHTTLWVIWRARNNRIFNNVS 272

Query: 58  F 56
           F
Sbjct: 273 F 273


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