BLASTX nr result

ID: Atractylodes21_contig00045973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045973
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35295.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18
emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]    96   2e-18
ref|XP_002526448.1| pentatricopeptide repeat-containing protein,...    96   4e-18
ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18

>emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/76 (60%), Positives = 55/76 (72%)
 Frame = -1

Query: 235 LAHRVFDKIPYPDRKNNVLLWNQLIRAYAWEGPFDHAINLYVEMMQSGATPNKYTYPFAL 56
           LA R+FD+IP P    +V+LWNQ+IRAYAW GPFD AI+LY  M+  G  PNKYTYPF L
Sbjct: 61  LARRLFDEIPNP----SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVL 116

Query: 55  KACSAIGDVEFGKLIH 8
           KACS +  +E G  IH
Sbjct: 117 KACSGLLAIEDGVEIH 132


>ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/76 (60%), Positives = 55/76 (72%)
 Frame = -1

Query: 235 LAHRVFDKIPYPDRKNNVLLWNQLIRAYAWEGPFDHAINLYVEMMQSGATPNKYTYPFAL 56
           LA R+FD+IP P    +V+LWNQ+IRAYAW GPFD AI+LY  M+  G  PNKYTYPF L
Sbjct: 61  LARRLFDEIPNP----SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVL 116

Query: 55  KACSAIGDVEFGKLIH 8
           KACS +  +E G  IH
Sbjct: 117 KACSGLLAIEDGVEIH 132


>emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/76 (60%), Positives = 55/76 (72%)
 Frame = -1

Query: 235 LAHRVFDKIPYPDRKNNVLLWNQLIRAYAWEGPFDHAINLYVEMMQSGATPNKYTYPFAL 56
           LA R+FD+IP P    +V+LWNQ+IRAYAW GPFD AI+LY  M+  G  PNKYTYPF L
Sbjct: 61  LARRLFDEIPNP----SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVL 116

Query: 55  KACSAIGDVEFGKLIH 8
           KACS +  +E G  IH
Sbjct: 117 KACSGLLAIEDGVEIH 132


>ref|XP_002526448.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534228|gb|EEF35943.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 557

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/77 (58%), Positives = 55/77 (71%)
 Frame = -1

Query: 238 ELAHRVFDKIPYPDRKNNVLLWNQLIRAYAWEGPFDHAINLYVEMMQSGATPNKYTYPFA 59
           + A  +FDK P   RK  V++WN LIRAYAW GPF  AINLY +M++ G  P+KYTYPF 
Sbjct: 67  QYARHLFDKSPQRPRK--VVIWNMLIRAYAWNGPFTEAINLYYKMLELGIQPSKYTYPFV 124

Query: 58  LKACSAIGDVEFGKLIH 8
           LKACSA+  +E GK IH
Sbjct: 125 LKACSALQAIEEGKEIH 141


>ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|222872863|gb|EEF09994.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 42/77 (54%), Positives = 58/77 (75%)
 Frame = -1

Query: 238 ELAHRVFDKIPYPDRKNNVLLWNQLIRAYAWEGPFDHAINLYVEMMQSGATPNKYTYPFA 59
           ++A  VFDK+P+  R  NV+LWN LIRAYAW GP++ AI+LY +M+  G TPN++T+PF 
Sbjct: 68  KIARHVFDKMPH--RPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFV 125

Query: 58  LKACSAIGDVEFGKLIH 8
           LKACSA+ +   G+ IH
Sbjct: 126 LKACSALKEASEGREIH 142


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