BLASTX nr result

ID: Atractylodes21_contig00045912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045912
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...   160   2e-37
ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi...   147   2e-33
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...   137   2e-30
emb|CBI19389.3| unnamed protein product [Vitis vinifera]              135   5e-30
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   135   5e-30

>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  160 bits (405), Expect = 2e-37
 Identities = 74/98 (75%), Positives = 89/98 (90%)
 Frame = -3

Query: 648 FYKEIKLKGLVPKGSTYMILICSLAMEQRFKDSIGVIFDMLNDSMSPDMLTYKTLLEGLC 469
           FYKE+K KGLVP GSTYMILICSL ME+RF+++IGV+FDML DSMSPD+LTY+T+LEGLC
Sbjct: 227 FYKEMKGKGLVPSGSTYMILICSLGMERRFEEAIGVVFDMLGDSMSPDLLTYRTVLEGLC 286

Query: 468 REGRADEAFDVLEEFRKKDSFMNEKTYKNLLNGLHYVS 355
           REG  D+AF++LEE+RKKD FM EK YK+LLNGLH+VS
Sbjct: 287 REGMVDKAFELLEEWRKKDGFMGEKNYKSLLNGLHFVS 324


>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
           gi|449516331|ref|XP_004165200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
          Length = 393

 Score =  147 bits (370), Expect = 2e-33
 Identities = 67/97 (69%), Positives = 85/97 (87%)
 Frame = -3

Query: 648 FYKEIKLKGLVPKGSTYMILICSLAMEQRFKDSIGVIFDMLNDSMSPDMLTYKTLLEGLC 469
           FYKE++++GL+P  STYMILICSLAME+RF+++I + FDML +SM+PD+LTY+TLLEGLC
Sbjct: 294 FYKEMRVRGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLC 353

Query: 468 REGRADEAFDVLEEFRKKDSFMNEKTYKNLLNGLHYV 358
           REGR  EAFD+L+E RK+D  MNEKT+K LLNGLH V
Sbjct: 354 REGRDSEAFDLLDELRKRDKLMNEKTFKTLLNGLHTV 390


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score =  137 bits (345), Expect = 2e-30
 Identities = 64/98 (65%), Positives = 82/98 (83%)
 Frame = -3

Query: 648 FYKEIKLKGLVPKGSTYMILICSLAMEQRFKDSIGVIFDMLNDSMSPDMLTYKTLLEGLC 469
           FYKE+K K L+P G TYMILICSLA++ R  ++I V+FDML +SMSPD LTY+T+LEGLC
Sbjct: 283 FYKEMKRKELIPSGGTYMILICSLAVDLRLGEAIDVVFDMLANSMSPDFLTYRTVLEGLC 342

Query: 468 REGRADEAFDVLEEFRKKDSFMNEKTYKNLLNGLHYVS 355
           REG+ DEAF++LEEFRK+D  M++KTYK LLN L +V+
Sbjct: 343 REGKTDEAFELLEEFRKRDMSMSQKTYKILLNALQFVN 380


>emb|CBI19389.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  135 bits (341), Expect = 5e-30
 Identities = 60/98 (61%), Positives = 85/98 (86%)
 Frame = -3

Query: 648 FYKEIKLKGLVPKGSTYMILICSLAMEQRFKDSIGVIFDMLNDSMSPDMLTYKTLLEGLC 469
           FY+E++ K LVP  STY+ILICSL+ME+RF+++  ++FDML +SM+PD+LTYKTLLEGL 
Sbjct: 266 FYREMRSKDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLS 325

Query: 468 REGRADEAFDVLEEFRKKDSFMNEKTYKNLLNGLHYVS 355
           REG+ ++AF++LE+ RKKD++M EKTYK L+ GLH++S
Sbjct: 326 REGKCNDAFELLEDLRKKDAWMGEKTYKTLVKGLHFLS 363


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  135 bits (341), Expect = 5e-30
 Identities = 60/98 (61%), Positives = 85/98 (86%)
 Frame = -3

Query: 648 FYKEIKLKGLVPKGSTYMILICSLAMEQRFKDSIGVIFDMLNDSMSPDMLTYKTLLEGLC 469
           FY+E++ K LVP  STY+ILICSL+ME+RF+++  ++FDML +SM+PD+LTYKTLLEGL 
Sbjct: 294 FYREMRSKDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLS 353

Query: 468 REGRADEAFDVLEEFRKKDSFMNEKTYKNLLNGLHYVS 355
           REG+ ++AF++LE+ RKKD++M EKTYK L+ GLH++S
Sbjct: 354 REGKCNDAFELLEDLRKKDAWMGEKTYKTLVKGLHFLS 391


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