BLASTX nr result

ID: Atractylodes21_contig00045889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045889
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]    72   4e-11
ref|XP_002302447.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003530402.1| PREDICTED: CST complex subunit CTC1-like [Gl...    67   1e-09
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...    62   6e-08
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu...    62   6e-08

>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = +1

Query: 16  TIYIYCYMRDAKSRNHILFPSMDREEDFKELESGRFHLLWLVHKFPVQRKFPGDDA-SNS 192
           T+Y+Y ++R +  +  ++ P M+ +++ KE E GRFH+L + HKFPV +KF  D A S+ 
Sbjct: 752 TMYVYFHLRKSSLQKFLVHPHMNLKDNLKEPEDGRFHMLHVTHKFPVLQKFQKDQAVSDG 811

Query: 193 SSTYAEAIVLPWNLVL 240
            S + EA+VLPW+L L
Sbjct: 812 LSMFVEAVVLPWDLFL 827


>ref|XP_002302447.1| predicted protein [Populus trichocarpa] gi|222844173|gb|EEE81720.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +1

Query: 19  IYIYCYMRDAKSRNHILFPSMDREEDFKELESGRFHLLWLVHKFPVQRKFPGDDA-SNSS 195
           IY Y ++  A  +N   +PS+   ED +EL+SGRFHL+W+ HK+P+  +  GD    N +
Sbjct: 38  IYSYFHLSRATCKNLCFYPSVPFNEDLQELQSGRFHLIWISHKYPLLHQLQGDPVIPNRA 97

Query: 196 STYAEAIVLPWNL 234
           + + EA+ LPW+L
Sbjct: 98  NVFVEAVALPWDL 110


>ref|XP_003530402.1| PREDICTED: CST complex subunit CTC1-like [Glycine max]
          Length = 706

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/85 (36%), Positives = 53/85 (62%)
 Frame = +1

Query: 1   GRKRFTIYIYCYMRDAKSRNHILFPSMDREEDFKELESGRFHLLWLVHKFPVQRKFPGDD 180
           G    +I++YC+ ++AK +N  L+  ++ + + + LE G +HLL + HKFP+Q K+    
Sbjct: 238 GELSTSIFVYCHWKNAKCKNIPLYSCINSKNETETLEPGSYHLLRVSHKFPLQEKYSNKA 297

Query: 181 ASNSSSTYAEAIVLPWNLVLHKRER 255
            S  SST+ EAI+ P+ L+L  + R
Sbjct: 298 VSCKSSTFVEAILFPFILLLSGKSR 322


>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +1

Query: 16  TIYIYCYMRDAKSRNHILFPSMDREEDFKELESGRFHLLWLVHKFPVQRKFPGDD-ASNS 192
           TIY+Y   R+A  +    +   D   D    ESG + LL + HKFP+ +KF G   A N+
Sbjct: 664 TIYVYFQYRNASCKKLPSYSCNDNASDLVIFESGTYDLLEVTHKFPMSQKFQGKHLAPNT 723

Query: 193 SSTYAEAIVLPWNLVLHKRER 255
           SS + EA++ PWNL L + E+
Sbjct: 724 SSMFVEAVLHPWNLFLTESEK 744


>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1383

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +1

Query: 16  TIYIYCYMRDAKSRNHILFPSMDREEDFKELESGRFHLLWLVHKFPVQRKFPGDD-ASNS 192
           TIY+Y   R+A  +    +   D   D    ESG + LL + HKFP+ +KF G   A N+
Sbjct: 664 TIYVYFQYRNASCKKLPSYSCNDNASDLVIFESGTYDLLEVTHKFPMSQKFQGKHLAPNT 723

Query: 193 SSTYAEAIVLPWNLVLHKRER 255
           SS + EA++ PWNL L + E+
Sbjct: 724 SSMFVEAVLHPWNLFLTESEK 744


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