BLASTX nr result
ID: Atractylodes21_contig00045874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00045874
(606 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|2... 247 1e-63
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi... 244 9e-63
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,... 238 5e-61
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi... 214 1e-53
ref|NP_196771.1| pentatricopeptide repeat-containing protein [Ar... 186 2e-45
>ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|222865491|gb|EEF02622.1|
predicted protein [Populus trichocarpa]
Length = 707
Score = 247 bits (630), Expect = 1e-63
Identities = 118/196 (60%), Positives = 145/196 (73%)
Frame = +2
Query: 17 DVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLMLVEKLIE 196
DVITYN LISGYS G+S CLELYE MK G+KPTINT+HPLI GC +G+ L E L
Sbjct: 486 DVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFN 545
Query: 197 EMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEG 376
EM QMNL+ DRV+Y +I CY E G V+K F+L EMV G+ PD YN LI+G+LKEG
Sbjct: 546 EMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEG 605
Query: 377 NLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVAN 556
L ++KDLVD MKA GL+P+ADTY LI+G CD+K F+ A+ WYREM+ NGFLP+V + N
Sbjct: 606 KLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICN 665
Query: 557 QLLTGLMEEGRFQEVQ 604
+L TGL ++GR QE Q
Sbjct: 666 ELSTGLRKDGRLQEAQ 681
Score = 92.8 bits (229), Expect = 4e-17
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLMLVE 184
GL+ + I +N +I + E +KM GI P++ TY+ LI G G + V
Sbjct: 307 GLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDG---YGRLCVF 363
Query: 185 ----KLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCL 352
+++EEM + + + Y LI C + G + + + +MVG G+LP+ YN L
Sbjct: 364 SRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNML 423
Query: 353 IIGYLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGF 532
I G G L ++ D+M G+ TY++LIKGLC + K EA + + + G
Sbjct: 424 IDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGH 483
Query: 533 LPSVSVANQLLTGLMEEGRFQE 598
P V N L++G G Q+
Sbjct: 484 CPDVITYNSLISGYSNAGNSQK 505
Score = 87.0 bits (214), Expect = 2e-15
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
GL + YN +++GY GD + E+M+ G++P ++ +I C+ Q +
Sbjct: 272 GLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKA 331
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
E+ +++M + Y LI Y + F + +EM NG P+ ++Y LI
Sbjct: 332 EEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINC 391
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
K+G + +++ ++ M G++P A+ Y+ LI G C + K EA ++ EM NG +
Sbjct: 392 LCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGAT 451
Query: 542 VSVANQLLTGLMEEGRFQEVQ 604
+ N L+ GL + G+ +E +
Sbjct: 452 IVTYNSLIKGLCKMGKLKEAE 472
Score = 85.5 bits (210), Expect = 7e-15
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 1/195 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLI-VGCKNQGLMLV 181
G+ V TYN LI GY C ++ E+M+ +G KP + +Y LI CK+ ++
Sbjct: 342 GIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEA 401
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
E ++ +M + + +Y LI G + + +DEM NGI + YN LI G
Sbjct: 402 EMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKG 461
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
K G L +++++ + +TG P TY++LI G + + Y M G P+
Sbjct: 462 LCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPT 521
Query: 542 VSVANQLLTGLMEEG 586
++ + L++G +EG
Sbjct: 522 INTFHPLISGCSKEG 536
Score = 83.2 bits (204), Expect = 3e-14
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 37/220 (16%)
Frame = +2
Query: 23 ITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGL-----MLVE 184
+T+N LI GY G+ + + L E+MK ++P+I T++ L+ G CK + + ML E
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196
Query: 185 -------------------------------KLIEEMSQMNLNLDRVLYCELIRCYAEHG 271
L E + +D L+ + G
Sbjct: 197 IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEG 256
Query: 272 FVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVPKADTYD 451
VEK + +V +G++P + YN ++ GY + G++ ++ +++M++ GL P ++
Sbjct: 257 KVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFN 316
Query: 452 TLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTG 571
++I C+++ +A W ++MV G PSV N L+ G
Sbjct: 317 SVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDG 356
Score = 80.5 bits (197), Expect = 2e-13
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
G+K D T + L++G +G E+ + + G+ P Y+ ++ G C+ +
Sbjct: 237 GVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRA 296
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
IE+M L + + + +I + E ++K +MVG GI P YN LI G
Sbjct: 297 ILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDG 356
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
Y + + ++++M+ G P +Y +LI LC K EA R+MV G LP+
Sbjct: 357 YGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPN 416
Query: 542 VSVANQLLTGLMEEGRFQE 598
++ N L+ G G+ +E
Sbjct: 417 ANIYNMLIDGSCTVGKLRE 435
Score = 76.6 bits (187), Expect = 3e-12
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Frame = +2
Query: 2 VGLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLML 178
+G + D + Y + GD + +EL+E MK + P + Y+ LI G CK + +
Sbjct: 60 LGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRD 119
Query: 179 VEKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLII 358
EKL EMS NL +P+R+ +N LI
Sbjct: 120 AEKLFGEMSVRNL-----------------------------------VPNRVTFNTLID 144
Query: 359 GYLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLP 538
GY K G + + L ++MK + P T+++L+ GLC ++ EA E+ NGF+P
Sbjct: 145 GYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVP 204
Query: 539 SVSVANQLLTGLME 580
+ + GL++
Sbjct: 205 DGFTYSIIFDGLLK 218
Score = 75.9 bits (185), Expect = 5e-12
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGD-SHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLML 178
G D TY+ + G D + L+LY + G+K T L+ G CK +
Sbjct: 201 GFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEK 260
Query: 179 VEKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLII 358
E++++ + + L V+Y ++ Y + G +++ ++M G+ P+ +A+N +I
Sbjct: 261 AEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVID 320
Query: 359 GYLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLP 538
+ + + K+++ V KM G+ P +TY+ LI G + FS EM NG P
Sbjct: 321 KFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKP 380
Query: 539 SVSVANQLLTGLMEEGRFQEVQ 604
+V L+ L ++G+ E +
Sbjct: 381 NVISYGSLINCLCKDGKILEAE 402
Score = 65.5 bits (158), Expect = 7e-09
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Frame = +2
Query: 83 ELYEKMKVSGIKPTINTYHPLIVGC-KNQGLMLVEKLIEEMSQMNLNLDRVLYCELIRCY 259
ELY+ M+ G P+ ++ +++ V L +EM + D+++Y +
Sbjct: 17 ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76
Query: 260 AEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVPKA 439
+ G ++ L++ M ++P+ YN LI G KE + ++ L +M LVP
Sbjct: 77 VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136
Query: 440 DTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTGLMEEGRFQEVQ 604
T++TLI G C + A M PS+ N LL+GL + R +E +
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEAR 191
Score = 63.9 bits (154), Expect = 2e-08
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Frame = +2
Query: 2 VGLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLMLV 181
+ L D + YN +I Y G L ++M G++P TY+ LI+G +G +
Sbjct: 550 MNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSE 609
Query: 182 EK-LIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLII 358
K L+++M L + Y LI+ + + + Y EM+ NG LP+ N L
Sbjct: 610 TKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELST 669
Query: 359 GYLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKK 484
G K+G L +++ + +M A G+ D DT + L D+ K
Sbjct: 670 GLRKDGRLQEAQSICSEMIANGM----DNLDT-NEDLSDVAK 706
>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 244 bits (623), Expect = 9e-63
Identities = 118/195 (60%), Positives = 142/195 (72%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLMLVE 184
GL DVITYN LISGYS+ G+ LELYE MK SGIKPT+NTYH LI GC +GL+LVE
Sbjct: 597 GLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVE 656
Query: 185 KLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGY 364
K+ +EM QMNL DRV+Y LI CY EHG V+K +L+ M GI PD+M YNCLI+G+
Sbjct: 657 KIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGH 716
Query: 365 LKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSV 544
KEG +HK K+LV+ MK GL+PK +TYD LI G C +K F A+ WYREM NGF PSV
Sbjct: 717 FKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSV 776
Query: 545 SVANQLLTGLMEEGR 589
S+ + L+TGL EEGR
Sbjct: 777 SICDNLITGLREEGR 791
Score = 103 bits (257), Expect = 2e-20
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 36/219 (16%)
Frame = +2
Query: 23 ITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLVEKLIEE 199
ITYN LI GY G + E+MKV ++PTI T++ L+ G C+ Q + ++++EE
Sbjct: 253 ITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEE 312
Query: 200 MSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVG---------------------- 313
M DR Y L + + G V+ + L +E V
Sbjct: 313 MEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGN 372
Query: 314 -------------NGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVPKADTYDT 454
NG+ P + +N ++ GY + G+++K+ ++KM+A GL P TY++
Sbjct: 373 MEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNS 432
Query: 455 LIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTG 571
L+K C++K EA ++MV G LP+V N L+ G
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDG 471
Score = 100 bits (250), Expect = 2e-19
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 1/201 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
GL + +N +++GY GD + EKM+ G++P TY+ L+ C+ + +
Sbjct: 387 GLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEA 446
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
EK I++M + + + Y LI Y ++ F + +EM G+ P+ ++Y CLI
Sbjct: 447 EKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINC 506
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
K+ N+ +++ ++ M G+VP A Y+ LI G C K +A ++ EMVA +P+
Sbjct: 507 LCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPT 566
Query: 542 VSVANQLLTGLMEEGRFQEVQ 604
+ N L+ GL ++G+ E +
Sbjct: 567 LVTYNILINGLCKKGKVMEAE 587
Score = 92.0 bits (227), Expect = 7e-17
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 1/195 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLI-VGCKNQGLMLV 181
G+ +V TYN LI GY C ++ E+M+ G+KP + +Y LI CK+ ++
Sbjct: 457 GVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEA 516
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
E ++ +M + + +Y LI G ++ F +DEMV I+P + YN LI G
Sbjct: 517 EVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILING 576
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
K+G + ++++L ++ GL TY++LI G +A Y M +G P+
Sbjct: 577 LCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT 636
Query: 542 VSVANQLLTGLMEEG 586
++ ++L+ G +EG
Sbjct: 637 LNTYHRLIAGCGKEG 651
Score = 89.7 bits (221), Expect = 4e-16
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Frame = +2
Query: 2 VGLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLM-L 178
VGL+ + +TYN L+ + + + +KM G+ P + TY+ LI G L
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480
Query: 179 VEKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLII 358
+++EEM + L + + Y LI C + + + + +MV G++P+ YN LI
Sbjct: 481 CFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLID 540
Query: 359 GYLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLP 538
G G L + D+M A +VP TY+ LI GLC K EA E+ G
Sbjct: 541 GSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSF 600
Query: 539 SVSVANQLLTGLMEEGRFQE 598
V N L++G G Q+
Sbjct: 601 DVITYNSLISGYSSAGNVQK 620
Score = 79.3 bits (194), Expect = 5e-13
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
GL+ D Y I GD +EL MK G+ P + Y+ +I G CK + +
Sbjct: 177 GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDA 236
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
EKL +EM + +R+ Y LI Y + G +E+ F + + M + P + +N L+ G
Sbjct: 237 EKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
+ + +++ ++++M+ G VP TY TL G + T E V G
Sbjct: 297 LCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQIL 356
Query: 542 VSVANQLLTGLMEEGRFQEVQ 604
+ LL L +EG ++ +
Sbjct: 357 DYTCSILLNALCKEGNMEKAE 377
Score = 72.4 bits (176), Expect = 6e-11
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Frame = +2
Query: 83 ELYEKMKVSGIKPTI---NTYHPLIVGCKNQGLMLVEKLIEEMSQMNLNLDRVLYCELIR 253
ELY MK G+ P++ N + +V K L +L E+ + L D+ +Y + I+
Sbjct: 133 ELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTL--QLFSEIVESGLRPDQFMYGKAIQ 190
Query: 254 CYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVP 433
+ G +++ L M G+ P YN +I G KE + ++ L D+M + P
Sbjct: 191 AAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAP 250
Query: 434 KADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTGLMEEGRFQEVQ 604
TY+TLI G C + + EA M P++ N LL GL +E Q
Sbjct: 251 NRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQ 307
Score = 68.2 bits (165), Expect = 1e-09
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 1/201 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
G D TY L G+ G+ + L E+ G++ T L+ CK +
Sbjct: 317 GFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKA 376
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
E+++++ + L V + ++ Y + G + K + ++M G+ P+ + YN L+
Sbjct: 377 EEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKK 436
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
+ + N+ +++ + KM G++P +TY+TLI G F EM G P+
Sbjct: 437 FCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPN 496
Query: 542 VSVANQLLTGLMEEGRFQEVQ 604
V L+ L ++ E +
Sbjct: 497 VISYGCLINCLCKDANILEAE 517
Score = 56.6 bits (135), Expect = 3e-06
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Frame = +2
Query: 2 VGLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLM-L 178
+ L D + YN LI Y GD L+ M+ GI+P TY+ LI+G +G M
Sbjct: 665 MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHK 724
Query: 179 VEKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLII 358
V+ L+ +M L Y LI + + + + Y EM NG P + LI
Sbjct: 725 VKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLIT 784
Query: 359 GYLKEGNLHKSKDLVDKMKATG 424
G +EG H + + +M G
Sbjct: 785 GLREEGRSHDADVICSEMNMKG 806
>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 817
Score = 238 bits (608), Expect = 5e-61
Identities = 117/200 (58%), Positives = 141/200 (70%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLMLVE 184
G DVITYN LISGY+ G+ CL LYE MK GIKPT+ TYHPLI GC +G+ LVE
Sbjct: 591 GHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVE 650
Query: 185 KLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGY 364
KL EM QMNL DRV+Y +I CYAE G +K ++L+ M+ GI PD+M YN LI+G+
Sbjct: 651 KLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGH 710
Query: 365 LKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSV 544
+EG L KDLV+ MKA L PKADTYD L+KG CD+K FS A+ WYREMV N FLP+
Sbjct: 711 FREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNA 770
Query: 545 SVANQLLTGLMEEGRFQEVQ 604
S+ N+L GL +EGR QEVQ
Sbjct: 771 SICNELTAGLEQEGRLQEVQ 790
Score = 99.8 bits (247), Expect = 3e-19
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 36/226 (15%)
Frame = +2
Query: 2 VGLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLML 178
+ L ++TYN LI GY G+ ++ E+MK + P I T++ L+ G CK + +
Sbjct: 240 INLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKE 299
Query: 179 VEKLIEEMSQMNLNLD----RVLYCELIRC------------------------------ 256
L++EM D +L+ L+RC
Sbjct: 300 ARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLN 359
Query: 257 -YAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVP 433
+ G VEK + + NG++ D + YN + GY + G+++K+ +++M++ GL P
Sbjct: 360 GLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRP 419
Query: 434 KADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTG 571
+ T+++LI CD+K+ +A W ++M G PSV N L+ G
Sbjct: 420 NSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDG 465
Score = 92.0 bits (227), Expect = 7e-17
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGC-KNQGLMLV 181
GL+ + IT+N LI + + E +KM G+ P++ TY+ LI G K
Sbjct: 416 GLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRC 475
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
+++E+M ++ + + V Y LI C + G + + + +M+ G+LP+ YN LI G
Sbjct: 476 FQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDG 535
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
G + + D+M + + P TY+ LI GLC K +EA + ++ ++G P
Sbjct: 536 SCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPD 595
Query: 542 VSVANQLLTGLMEEG 586
V N L++G G
Sbjct: 596 VITYNSLISGYANAG 610
Score = 90.1 bits (222), Expect = 3e-16
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLI-VGCKNQGLMLV 181
G+ V TYN LI GY C ++ E+M+ G+KP + +Y LI CK+ ++
Sbjct: 451 GVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEA 510
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
E ++ +M + + +Y LI G V+ +DEM+ + I P + YN LI G
Sbjct: 511 EIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDG 570
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
K+G L +++D + ++ ++G P TY++LI G + S+ Y M G P+
Sbjct: 571 LCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPT 630
Query: 542 VSVANQLLTGLMEEG 586
V + L++G +EG
Sbjct: 631 VRTYHPLISGCSKEG 645
Score = 89.7 bits (221), Expect = 4e-16
Identities = 52/201 (25%), Positives = 105/201 (52%), Gaps = 1/201 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
GL D + YN ++GY GD + + E+M+ G++P T++ LI C + +
Sbjct: 381 GLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKA 440
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
E+ +++M++ + Y LI Y + ++ F + ++M G+ P+ ++Y LI
Sbjct: 441 EEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINC 500
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
K+G + +++ ++ M G++P A Y+ LI G C + K +A ++ EM+ + P+
Sbjct: 501 LCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPT 560
Query: 542 VSVANQLLTGLMEEGRFQEVQ 604
+ N L+ GL ++G+ E +
Sbjct: 561 LVTYNVLIDGLCKKGKLTEAE 581
Score = 82.0 bits (201), Expect = 7e-14
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
G D TY+ L G D + +ELYE+ GI+ T L+ G CK +
Sbjct: 311 GFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKA 370
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
E+++++ ++ L D V+Y + Y G + K + M G+ P+ + +N LI
Sbjct: 371 EEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDK 430
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
+ + K+++ V KM G+ P +TY+TLI G + F +M G P+
Sbjct: 431 FCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPN 490
Query: 542 VSVANQLLTGLMEEGRFQEVQ 604
V L+ L ++G+ E +
Sbjct: 491 VVSYGSLINCLCKDGKILEAE 511
Score = 80.9 bits (198), Expect = 2e-13
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
G + D Y I + M +E + M+ G++P + Y+ LI G C+ + +
Sbjct: 171 GFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDA 230
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
EK+ +EM +NL V Y LI Y + G ++ F + + M + P+ + +N L+ G
Sbjct: 231 EKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSG 290
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
K + +++ L+ +M+ G +P TY L GL + A Y + G +
Sbjct: 291 LCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRIN 350
Query: 542 VSVANQLLTGLMEEGRFQEVQ 604
+ LL GL ++G+ ++ +
Sbjct: 351 NYTGSILLNGLCKQGKVEKAE 371
Score = 65.5 bits (158), Expect = 7e-09
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Frame = +2
Query: 80 LELYEKMKVSGIKPTINTYHPLIVGC--KNQGLMLVEKLIEEMSQMNLNLDRVLYCELIR 253
+ELYE M+ G P++ + L+ C + + V L E+ D +Y + I+
Sbjct: 126 VELYEFMRRDGKLPSLVSLS-LLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQ 184
Query: 254 CYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVP 433
+ ++ D M G+ P+ YN LI G +E + ++ + D+M LV
Sbjct: 185 AAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVG 244
Query: 434 KADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTGLMEEGRFQEVQ 604
TY+TLI G C + + A M P++ N LL+GL + + +E +
Sbjct: 245 SIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEAR 301
Score = 57.8 bits (138), Expect = 1e-06
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 VGLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQG-LML 178
+ L D + YN +I Y+ G++ L++ M GI P TY+ LI+G +G L
Sbjct: 659 MNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSN 718
Query: 179 VEKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLII 358
++ L+ M L Y L++ + + + Y EMV N LP+ N L
Sbjct: 719 IKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTA 778
Query: 359 GYLKEGNLHKSKDLVDKMKATGLV 430
G +EG L + + + +M G++
Sbjct: 779 GLEQEGRLQEVQVICSEMNVKGII 802
>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 214 bits (544), Expect = 1e-53
Identities = 103/200 (51%), Positives = 142/200 (71%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLMLVE 184
G DVITYN LISGY+ ++ CLELY+KMK+ GIKPT+ T+HPLI C+ +G++ ++
Sbjct: 565 GCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMD 624
Query: 185 KLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGY 364
K+ +EM QM+L D+ +Y E+I YAE G V K +L+ +MV G+ D++ YN LI+ Y
Sbjct: 625 KMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAY 684
Query: 365 LKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSV 544
L++ + + K LVD MKA GLVPK DTY+ LIKGLCD+K F+ A+ WYREMV G L +V
Sbjct: 685 LRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNV 744
Query: 545 SVANQLLTGLMEEGRFQEVQ 604
S+ QL++GL EEG +E Q
Sbjct: 745 SMCYQLISGLREEGMLREAQ 764
Score = 96.7 bits (239), Expect = 3e-18
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Frame = +2
Query: 17 DVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLMLVEKLIE 196
+ +TYN LI GY G L E+MK ++ + TY+ L+ G G V+ E
Sbjct: 226 NTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGR--VDDARE 283
Query: 197 EMSQMN-------------------------------LNLDRVLYCELIRCYAEHGFVEK 283
+ +M + +D YC L+ G +EK
Sbjct: 284 VLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEK 343
Query: 284 TFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIK 463
+ ++V NG+ P +++YN L+ Y +EG++ K+ ++M+ GL P T++T+I
Sbjct: 344 AEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVIS 403
Query: 464 GLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTGLMEEGRF 592
C+ + A TW R MV G P+V N L+ G ++G F
Sbjct: 404 KFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHF 446
Score = 94.0 bits (232), Expect = 2e-17
Identities = 70/230 (30%), Positives = 101/230 (43%), Gaps = 36/230 (15%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLI-VGCKNQGL--- 172
G+ V TYN LI+GY KG C E ++M +GIKP + +Y LI CK++ L
Sbjct: 425 GVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDA 484
Query: 173 --------------------MLVE------------KLIEEMSQMNLNLDRVLYCELIRC 256
ML+E + +EM Q ++ V Y LI
Sbjct: 485 EIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLING 544
Query: 257 YAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVPK 436
+G V+K L+ +M G G PD + YN LI GY K N K +L DKMK G+ P
Sbjct: 545 LGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPT 604
Query: 437 ADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTGLMEEG 586
T+ LI C + ++EM+ +P V N+++ E+G
Sbjct: 605 VGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDG 653
Score = 85.5 bits (210), Expect = 7e-15
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 1/201 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
G+ I+YN L++ Y +GD + E+M+ G++P T++ +I C+ +
Sbjct: 355 GVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHA 414
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
E + M + ++ Y LI Y + G + F DEM GI P+ ++Y LI
Sbjct: 415 ETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINC 474
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
K+ L ++ ++ M G+ P A+ Y+ LI+ C + K +A ++ EM+ +G +
Sbjct: 475 LCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDAT 534
Query: 542 VSVANQLLTGLMEEGRFQEVQ 604
+ N L+ GL GR ++ +
Sbjct: 535 LVTYNTLINGLGRNGRVKKAE 555
Score = 77.4 bits (189), Expect = 2e-12
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 1/190 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQG-LMLV 181
GL+ + IT+N +IS + G+ +M G+ PT+ TY+ LI G +G +
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRC 449
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
+ ++EM + + + + Y LI C + + + +M+G G+ P+ YN LI
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
L + D+M +G+ TY+TLI GL + +A + +M G P
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569
Query: 542 VSVANQLLTG 571
V N L++G
Sbjct: 570 VITYNSLISG 579
Score = 76.6 bits (187), Expect = 3e-12
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Frame = +2
Query: 8 LKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLVE 184
++ D TY L++G G E+ K+ +G+ P+ +Y+ L+ C+ +
Sbjct: 321 IRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAI 380
Query: 185 KLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGY 364
E+M + L +R+ + +I + E G V+ MV G+ P YN LI GY
Sbjct: 381 LTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGY 440
Query: 365 LKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSV 544
++G+ + + +D+M G+ P +Y +LI LC +K +A +M+ G P+
Sbjct: 441 GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNA 500
Query: 545 SVANQLL 565
+ N L+
Sbjct: 501 EIYNMLI 507
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/118 (25%), Positives = 59/118 (50%)
Frame = +2
Query: 245 LIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATG 424
L+R + EKT A++ +++ +G PD +AY + + +L K +L+ M G
Sbjct: 128 LLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDG 187
Query: 425 LVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTGLMEEGRFQE 598
+ P Y+ ++ GLC +++ +A + EM+ +P+ N L+ G + G +E
Sbjct: 188 MGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEE 245
Score = 60.5 bits (145), Expect = 2e-07
Identities = 47/225 (20%), Positives = 95/225 (42%), Gaps = 29/225 (12%)
Frame = +2
Query: 17 DVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKP------------------------- 121
+++TYN L++G G E+ +M+ SG P
Sbjct: 261 NLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKE 320
Query: 122 ---TINTYHPLIVG-CKNQGLMLVEKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTF 289
TY L+ G C+ + E+++ ++ + + ++ Y L+ Y + G V+K
Sbjct: 321 IRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAI 380
Query: 290 ALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGL 469
++M G+ P+R+ +N +I + + G + ++ V +M G+ P +TY++LI G
Sbjct: 381 LTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGY 440
Query: 470 CDIKKFSEAHTWYREMVANGFLPSVSVANQLLTGLMEEGRFQEVQ 604
F + EM G P+V L+ L ++ + + +
Sbjct: 441 GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAE 485
Score = 60.1 bits (144), Expect = 3e-07
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Frame = +2
Query: 83 ELYEKMKVSGIKPTINTYHPLI---VGCKNQGLMLVEKLIEEMSQMNLNLDRVLYCELIR 253
+LY M+ G P+ + + L+ V ++ L + ++ D V Y + ++
Sbjct: 108 DLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLA--VFADVIDSGTRPDAVAYGKAVQ 165
Query: 254 CYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVP 433
++K F L MV +G+ P AYN ++ G K + ++ L D+M +VP
Sbjct: 166 AAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVP 225
Query: 434 KADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTGLMEEGRFQEVQ 604
TY+TLI G C + EA + M ++ N LL GL GR + +
Sbjct: 226 NTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +2
Query: 293 LYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLC 472
L+DEM+ ++P+ + YN LI GY K G + ++ ++MK + TY++L+ GLC
Sbjct: 214 LFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLC 273
Query: 473 DIKKFSEAHTWYREMVANGFLP 538
+ +A EM +GFLP
Sbjct: 274 GSGRVDDAREVLLEMEGSGFLP 295
>ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product
[Arabidopsis thaliana] gi|28973713|gb|AAO64173.1| unknown
protein [Arabidopsis thaliana] gi|29824237|gb|AAP04079.1|
unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein
[Arabidopsis thaliana] gi|332004380|gb|AED91763.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 816
Score = 186 bits (473), Expect = 2e-45
Identities = 94/200 (47%), Positives = 129/200 (64%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLMLVE 184
GLK DV TYN LISGY G+ C+ LYE+MK SGIKPT+ TYH LI C +G+ L E
Sbjct: 594 GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTE 653
Query: 185 KLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGY 364
+L EMS L D ++Y ++ CYA HG +EK F L +M+ I D+ YN LI+G
Sbjct: 654 RLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 365 LKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSV 544
LK G L + + L+D+M A + P+ADTY+ ++KG C++K + A+ WYREM GFL V
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Query: 545 SVANQLLTGLMEEGRFQEVQ 604
+ N+L++GL EE R +E +
Sbjct: 771 CIGNELVSGLKEEWRSKEAE 790
Score = 85.9 bits (211), Expect = 5e-15
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 1/199 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
G+K + T + L++ +G E+ + G+ P Y+ +I G C+ L+
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
IE M + + D + Y LIR + E G +E ++M G+ P YN LI G
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 468
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
Y ++ K D++ +M+ G +P +Y TLI LC K EA R+M G P
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPK 528
Query: 542 VSVANQLLTGLMEEGRFQE 598
V + N L+ G +G+ ++
Sbjct: 529 VRIYNMLIDGCCSKGKIED 547
Score = 85.5 bits (210), Expect = 7e-15
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 1/202 (0%)
Frame = +2
Query: 2 VGLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLML 178
+G D T++ L GYS+ + L +YE SG+K T L+ CK +
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 179 VEKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLII 358
E+++ L + V+Y +I Y G + + M G+ PD +AYNCLI
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 359 GYLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLP 538
+ + G + ++ V+KMK G+ P +TY+ LI G +F + +EM NG +P
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 539 SVSVANQLLTGLMEEGRFQEVQ 604
+V L+ L + + E Q
Sbjct: 493 NVVSYGTLINCLCKGSKLLEAQ 514
Score = 83.6 bits (205), Expect = 3e-14
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Frame = +2
Query: 20 VITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLML-VEKLIE 196
+ITYN LI GY G+ ++ E+MK I+P++ T++ L+ G G++ E +++
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 197 EMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEG 376
EM + D + L Y+ + E +Y+ V +G+ + + L+ KEG
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG 368
Query: 377 NLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVAN 556
+ K+++++ + A GLVP Y+T+I G C A M G P N
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 557 QLLTGLMEEGRFQEVQ 604
L+ E G + +
Sbjct: 429 CLIRRFCELGEMENAE 444
Score = 81.6 bits (200), Expect = 1e-13
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
Frame = +2
Query: 80 LELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLVEKLIEEMSQMNLNLDRVLYCELIRC 256
LEL+ +MK I P++ Y+ LI G CK + + E+L +EM L + Y LI
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 257 YAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVPK 436
Y + G EK+F + + M + I P + +N L+ G K G + +++++ +MK G VP
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 437 ADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTGLMEEGRFQEVQ 604
A T+ L G +K A Y V +G + + LL L +EG+ ++ +
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Score = 80.1 bits (196), Expect = 3e-13
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 1/198 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGC-KNQGLMLV 181
G+K D + YNCLI + G+ + KMK+ G+ P++ TY+ LI G +
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
+++EM + V Y LI C + + + + +M G+ P YN LI G
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
+G + + +M G+ TY+TLI GL K SEA E+ G P
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 542 VSVANQLLTGLMEEGRFQ 595
V N L++G G Q
Sbjct: 599 VFTYNSLISGYGFAGNVQ 616
Score = 79.7 bits (195), Expect = 4e-13
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVG-CKNQGLMLV 181
GL + + YN +I GY KGD E M+ G+KP Y+ LI C+ +
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 182 EKLIEEMSQMNLNLDRVLYCELIRCYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIG 361
EK + +M ++ Y LI Y +K F + EM NG +P+ ++Y LI
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 362 YLKEGNLHKSKDLVDKMKATGLVPKADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPS 541
K L +++ + M+ G+ PK Y+ LI G C K +A + +EM+ G +
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 542 VSVANQLLTGLMEEGRFQEVQ 604
+ N L+ GL G+ E +
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAE 584
Score = 65.5 bits (158), Expect = 7e-09
Identities = 60/224 (26%), Positives = 91/224 (40%), Gaps = 37/224 (16%)
Frame = +2
Query: 5 GLKRDVITYNCLISGYSTKGDSHMCLELYEKMKVSGIKPTINTYHPLIVGCKNQGLMLVE 184
G+ V TYN LI GY K + C ++ ++M+ +G P + +Y LI C +G L+E
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI-NCLCKGSKLLE 512
Query: 185 KLI-------------------------------------EEMSQMNLNLDRVLYCELIR 253
I +EM + + L+ V Y LI
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 254 CYAEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVP 433
+ G + + L E+ G+ PD YN LI GY GN+ + L ++MK +G+ P
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 434 KADTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLL 565
TY LI LC + + EM P + V N +L
Sbjct: 633 TLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVL 672
Score = 58.9 bits (141), Expect = 7e-07
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Frame = +2
Query: 83 ELYEKMKVSGIKPTINTYHPLIVGC-KNQGLMLVEKLIEEMSQMNLNLDRVLYCELIRCY 259
+L+ ++ GI P+ ++ L+ K + + + + + + + +Y + I+
Sbjct: 130 DLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAA 189
Query: 260 AEHGFVEKTFALYDEMVGNGILPDRMAYNCLIIGYLKEGNLHKSKDLVDKMKATGLVPKA 439
+ V K L++ M + I P YN LI G K ++ ++ L D+M A L+P
Sbjct: 190 VKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSL 249
Query: 440 DTYDTLIKGLCDIKKFSEAHTWYREMVANGFLPSVSVANQLLTGLMEEGRFQEVQ 604
TY+TLI G C ++ M A+ PS+ N LL GL + G ++ +
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304