BLASTX nr result

ID: Atractylodes21_contig00045832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045832
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    99   4e-19
ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat...    99   4e-19
ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat...    94   1e-17
ref|XP_002518803.1| pentatricopeptide repeat-containing protein,...    91   1e-16
emb|CBI27486.3| unnamed protein product [Vitis vinifera]               91   1e-16

>ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/89 (51%), Positives = 61/89 (68%)
 Frame = +2

Query: 2   LGRFEEANDCFLRMKTFRVLPRARSCNFLLGRSTXXXXXXXXXXXXXXXVGAGIKLSVFT 181
           LG  EEAN+CF RM+ FR LP+ARSCNFLL R +               +GAGI  SVFT
Sbjct: 173 LGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFT 232

Query: 182 YNIMIDYLCKEGDMKGAQSLYSEMKVLGI 268
           YN+MIDYLCKEGD++ ++ L+ +M+ +G+
Sbjct: 233 YNVMIDYLCKEGDLENSRRLFVQMREMGL 261


>ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/89 (51%), Positives = 61/89 (68%)
 Frame = +2

Query: 2   LGRFEEANDCFLRMKTFRVLPRARSCNFLLGRSTXXXXXXXXXXXXXXXVGAGIKLSVFT 181
           LG  EEAN+CF RM+ FR LP+ARSCNFLL R +               +GAGI  SVFT
Sbjct: 232 LGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFT 291

Query: 182 YNIMIDYLCKEGDMKGAQSLYSEMKVLGI 268
           YN+MIDYLCKEGD++ ++ L+ +M+ +G+
Sbjct: 292 YNVMIDYLCKEGDLENSRRLFVQMREMGL 320


>ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/88 (53%), Positives = 59/88 (67%)
 Frame = +2

Query: 2   LGRFEEANDCFLRMKTFRVLPRARSCNFLLGRSTXXXXXXXXXXXXXXXVGAGIKLSVFT 181
           LG  EEA++CFL+M+ FRV P+ RSCN LL R +                 AGIK SVFT
Sbjct: 198 LGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFT 257

Query: 182 YNIMIDYLCKEGDMKGAQSLYSEMKVLG 265
           YNIMIDYLCKEGD++ A+SL+++MK  G
Sbjct: 258 YNIMIDYLCKEGDLEMARSLFTQMKEAG 285


>ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542184|gb|EEF43728.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 775

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/89 (52%), Positives = 54/89 (60%)
 Frame = +2

Query: 2   LGRFEEANDCFLRMKTFRVLPRARSCNFLLGRSTXXXXXXXXXXXXXXXVGAGIKLSVFT 181
           LG  EEA  CF RM  FRV P+ARSCN  L R                 VGAGI  SVFT
Sbjct: 195 LGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFT 254

Query: 182 YNIMIDYLCKEGDMKGAQSLYSEMKVLGI 268
           YNIMI Y+CKEGDM  A+SL+ +MK +G+
Sbjct: 255 YNIMIGYMCKEGDMVTAKSLFHQMKQMGL 283


>emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/84 (53%), Positives = 57/84 (67%)
 Frame = +2

Query: 14  EEANDCFLRMKTFRVLPRARSCNFLLGRSTXXXXXXXXXXXXXXXVGAGIKLSVFTYNIM 193
           EEA++CFL+M+ FRV P+ RSCN LL R +                 AGIK SVFTYNIM
Sbjct: 3   EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62

Query: 194 IDYLCKEGDMKGAQSLYSEMKVLG 265
           IDYLCKEGD++ A+SL+++MK  G
Sbjct: 63  IDYLCKEGDLEMARSLFTQMKEAG 86


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