BLASTX nr result

ID: Atractylodes21_contig00045729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045729
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...    68   7e-10
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = +3

Query: 3   EKLFKILKRLKCLDDKMYCLLLQTYMAAGITDPDIRQRIERDGIPITPELEDLLKKVC 176
           E+L KILK +  LD   Y LLL+TY+AAG   P++RQR+E DGI I PELE+LL++VC
Sbjct: 415 ERLCKILKHINRLDSNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLERVC 472


>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = +3

Query: 3   EKLFKILKRLKCLDDKMYCLLLQTYMAAGITDPDIRQRIERDGIPITPELEDLLKKVC 176
           EKL KILK + CL+  +Y LLL+TY+AAG   P++RQR+E D I I+ ELE LL+ VC
Sbjct: 445 EKLSKILKHINCLNSSVYSLLLKTYIAAGKLAPEMRQRLEEDNIEISDELEYLLESVC 502


>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
           gi|449518825|ref|XP_004166436.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
          Length = 474

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = +3

Query: 3   EKLFKILKRLKCLDDKMYCLLLQTYMAAGITDPDIRQRIERDGIPITPELEDLLKKVCSE 182
           E   +ILKRLKCLD   Y LLL+TY+AAG   PD+R+R++ D I I+ ELE+LL  VC +
Sbjct: 415 EDFARILKRLKCLDASGYHLLLKTYVAAGKLAPDMRKRLKEDDIEISSELEELLGTVCPQ 474


>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = +3

Query: 3   EKLFKILKRLKCLDDKMYCLLLQTYMAAGITDPDIRQRIERDGIPITPELEDLLKKV 173
           E+L KI K++  L+   Y LLL+TY AAG   P++RQR+E D I I PELE+LL++V
Sbjct: 417 ERLCKIWKQINRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLLERV 473


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