BLASTX nr result

ID: Atractylodes21_contig00045711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045711
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-45
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   162   2e-45
emb|CBI21840.3| unnamed protein product [Vitis vinifera]              162   2e-45
ref|XP_002330626.1| predicted protein [Populus trichocarpa] gi|2...   155   7e-44
ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containi...   143   2e-42

>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  162 bits (411), Expect(2) = 2e-45
 Identities = 80/155 (51%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
 Frame = -1

Query: 470 YLDQSSGNVAVHLDLVSRVHGVDQAEKFFGTIPDSLKNYKVYGTLLNCYAFKKSLKKAEA 291
           Y D S G+VA+ LDL+S+VHG++QAEK+F   P+SL++++VYG LLNCY+ KKSL+KAEA
Sbjct: 98  YFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEA 157

Query: 290 TMEKMKQLGCTTTHSYNSMLSLYNKTKKYEKLVALVNEMEKTGVRYHRSTYYIQLTAY-A 114
            M++M+ +G   T SYN ML LY++  K+EKL  L+ EME+ G+     TY I+L AY A
Sbjct: 158 IMQEMRDMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCA 217

Query: 113 SFDIKAMEKLLGCMENNPDLPLDWHVYIISAKGYL 9
           + D++ MEKLL  +E +P +  DW+ YI++A GYL
Sbjct: 218 TSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYL 252



 Score = 46.6 bits (109), Expect(2) = 2e-45
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = -3

Query: 702 RVL-FNASFSTTNAQTPSIQNHDLLYKRISPAAITPRASIVPILDQWVQEGKEIIVDEVK 526
           RVL ++    T+NA   S+Q+      RISPA I  R SIVP L+QW +EG+ I   ++ 
Sbjct: 19  RVLPYSTETLTSNAPKESLQS------RISPA-IDLRVSIVPALEQWRKEGRSIKQQDLH 71

Query: 525 NIIKILRNQNRYAQALQ 475
            +I+ LR   RY  AL+
Sbjct: 72  RLIRKLRTFKRYNHALE 88


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  162 bits (411), Expect(2) = 2e-45
 Identities = 80/155 (51%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
 Frame = -1

Query: 470 YLDQSSGNVAVHLDLVSRVHGVDQAEKFFGTIPDSLKNYKVYGTLLNCYAFKKSLKKAEA 291
           Y D S G+VA+ LDL+S+VHG++QAEK+F   P+SL++++VYG LLNCY+ KKSL+KAEA
Sbjct: 98  YFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEA 157

Query: 290 TMEKMKQLGCTTTHSYNSMLSLYNKTKKYEKLVALVNEMEKTGVRYHRSTYYIQLTAY-A 114
            M++M+ +G   T SYN ML LY++  K+EKL  L+ EME+ G+     TY I+L AY A
Sbjct: 158 IMQEMRDMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCA 217

Query: 113 SFDIKAMEKLLGCMENNPDLPLDWHVYIISAKGYL 9
           + D++ MEKLL  +E +P +  DW+ YI++A GYL
Sbjct: 218 TSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYL 252



 Score = 46.6 bits (109), Expect(2) = 2e-45
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = -3

Query: 702 RVL-FNASFSTTNAQTPSIQNHDLLYKRISPAAITPRASIVPILDQWVQEGKEIIVDEVK 526
           RVL ++    T+NA   S+Q+      RISPA I  R SIVP L+QW +EG+ I   ++ 
Sbjct: 19  RVLPYSTETLTSNAPKESLQS------RISPA-IDLRVSIVPALEQWRKEGRSIKQQDLH 71

Query: 525 NIIKILRNQNRYAQALQ 475
            +I+ LR   RY  AL+
Sbjct: 72  RLIRKLRTFKRYNHALE 88


>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  162 bits (411), Expect(2) = 2e-45
 Identities = 80/155 (51%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
 Frame = -1

Query: 470 YLDQSSGNVAVHLDLVSRVHGVDQAEKFFGTIPDSLKNYKVYGTLLNCYAFKKSLKKAEA 291
           Y D S G+VA+ LDL+S+VHG++QAEK+F   P+SL++++VYG LLNCY+ KKSL+KAEA
Sbjct: 98  YFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEA 157

Query: 290 TMEKMKQLGCTTTHSYNSMLSLYNKTKKYEKLVALVNEMEKTGVRYHRSTYYIQLTAY-A 114
            M++M+ +G   T SYN ML LY++  K+EKL  L+ EME+ G+     TY I+L AY A
Sbjct: 158 IMQEMRDMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCA 217

Query: 113 SFDIKAMEKLLGCMENNPDLPLDWHVYIISAKGYL 9
           + D++ MEKLL  +E +P +  DW+ YI++A GYL
Sbjct: 218 TSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYL 252



 Score = 46.6 bits (109), Expect(2) = 2e-45
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = -3

Query: 702 RVL-FNASFSTTNAQTPSIQNHDLLYKRISPAAITPRASIVPILDQWVQEGKEIIVDEVK 526
           RVL ++    T+NA   S+Q+      RISPA I  R SIVP L+QW +EG+ I   ++ 
Sbjct: 19  RVLPYSTETLTSNAPKESLQS------RISPA-IDLRVSIVPALEQWRKEGRSIKQQDLH 71

Query: 525 NIIKILRNQNRYAQALQ 475
            +I+ LR   RY  AL+
Sbjct: 72  RLIRKLRTFKRYNHALE 88


>ref|XP_002330626.1| predicted protein [Populus trichocarpa] gi|222872230|gb|EEF09361.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  155 bits (393), Expect(2) = 7e-44
 Identities = 81/153 (52%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
 Frame = -1

Query: 464 DQSSGNVAVHLDLVSRVHGVDQAEKFFGTIPDSLKNYKVYGTLLNCYAFKKSLKKAEATM 285
           +QS G+ AV LDL+S+VHG++QAE+++ +IPD L+  +VYG LLNCYA K+ L+KAEATM
Sbjct: 69  EQSPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAHKRRLEKAEATM 128

Query: 284 EKMKQLGCTTTHSYNSMLSLYNKTKKYEKLVALVNEMEKTGVRYHRSTYYIQLTAY-ASF 108
           +KM++LG   T SYN MLSLY+   +YEKL ALV EME+ GV     T+ I+L AY A+ 
Sbjct: 129 QKMRELGLVQTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVATS 188

Query: 107 DIKAMEKLLGCMENNPDLPLDWHVYIISAKGYL 9
           +I+ MEKLL  ME +  + +D+H +   A GYL
Sbjct: 189 NIEEMEKLLMKMETDSLINIDFHTFFAVANGYL 221



 Score = 48.1 bits (113), Expect(2) = 7e-44
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = -3

Query: 624 RISPAAITPRASIVPILDQWVQEGKEIIVDEVKNIIKILRNQNRYAQALQ 475
           RIS A   P+ SI+P+++QW++EG  I   +++N IK+ R   R++ ALQ
Sbjct: 9   RISRAG-NPKVSIIPVIEQWLKEGNSIKQSDLQNFIKLFRRHRRFSHALQ 57


>ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 493

 Score =  143 bits (361), Expect(2) = 2e-42
 Identities = 74/151 (49%), Positives = 105/151 (69%), Gaps = 2/151 (1%)
 Frame = -1

Query: 458 SSGNVAVHLDLVSRVHGVDQAEKFFGTIPDSLKNYKVYGTLLNCYAFKKSLKKAEATMEK 279
           S+G++AV L L+S+  G++QAEK+F +I +S +++KVYG LL+CY   K+LKKAEA M+K
Sbjct: 103 STGDIAVELHLISKARGLEQAEKYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQK 162

Query: 278 MKQLG-CTTTHSYNSMLSLYNKTKKYEKLVALVNEMEKTGVRYHRSTYYIQLTAY-ASFD 105
           M+++G   T  SYN+ML+LY    K+EKL  L+ EME+ G+   R TY I++ AY A+ D
Sbjct: 163 MREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAAASD 222

Query: 104 IKAMEKLLGCMENNPDLPLDWHVYIISAKGY 12
           I  MEKLL  ME +P +  DWH Y +   GY
Sbjct: 223 ITNMEKLLSKMEADPLVATDWHTYFVVGNGY 253



 Score = 55.8 bits (133), Expect(2) = 2e-42
 Identities = 31/74 (41%), Positives = 46/74 (62%)
 Frame = -3

Query: 696 LFNASFSTTNAQTPSIQNHDLLYKRISPAAITPRASIVPILDQWVQEGKEIIVDEVKNII 517
           L  A F +T +  PS    D L++R+  A   PR SIV +LDQWV+EG+++   +++ +I
Sbjct: 18  LLRALFYSTKS-LPSPSTEDTLFRRVYRAG-DPRTSIVRVLDQWVEEGRQVKQSDLQTLI 75

Query: 516 KILRNQNRYAQALQ 475
           K LR   R+ QALQ
Sbjct: 76  KQLRKFGRFNQALQ 89


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