BLASTX nr result
ID: Atractylodes21_contig00045646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00045646
(572 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|2... 104 1e-20
ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1,... 102 3e-20
ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago trunc... 95 7e-18
gb|AAF81910.1|AF277377_1 5' repair endonuclease [Arabidopsis tha... 92 5e-17
ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like... 92 5e-17
>ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|222834003|gb|EEE72480.1|
predicted protein [Populus trichocarpa]
Length = 982
Score = 104 bits (259), Expect = 1e-20
Identities = 72/205 (35%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Frame = +1
Query: 10 KYLLSKVQLHALP----KRNKKKPQNTKGFGVLDGMAPLTPGKRVEGSSLVTQEHDALLA 177
KYLLSKV+L LP K+ K KP+ KGFG+LDG+ P+T + E SS QEHD LL
Sbjct: 457 KYLLSKVELGGLPAPEKKKAKLKPKEPKGFGILDGVVPVTTVQSAEASSTNKQEHDVLLV 516
Query: 178 AATKISKEAQKGIEVVDD--PQNCEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAAL 351
AA+KI + ++G+ V D+ P +
Sbjct: 517 AASKIRNQYKRGLVVEDELQPLADSSKKGAKEKGKEHKKRGQATGQDSGSKDNDSNIDTV 576
Query: 352 IKE--SESTSENAGKKVEINPG----------EHTTIGGSVLKKHAEGAGVEQLRSGKRI 495
IK+ S S+N + VE + + ++ L++HAE G+ R+ K I
Sbjct: 577 IKDLPEISGSKNKSQTVENDQAAIDGYYEANLQRASVNKGALQRHAEELGLTGSRNAKPI 636
Query: 496 PPVHFYAYESGQQVLDILKPSAIVV 570
PPVHF+A ES Q +LDILKPS ++V
Sbjct: 637 PPVHFHALESDQPILDILKPSVVIV 661
>ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Ricinus
communis] gi|223529184|gb|EEF31160.1| DNA repair
endonuclease xp-f / mei-9 / rad1, putative [Ricinus
communis]
Length = 887
Score = 102 bits (255), Expect = 3e-20
Identities = 67/190 (35%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
Frame = +1
Query: 10 KYLLSKVQLHALPKRNKKKPQ--NTKGFGVLDGMAPLTPGKRVEGSSLVTQEHDALLAAA 183
KYLLSKV+LH++P KKKP+ +KGFG+LDG+ P+ + E SS+ QE+DALLAA
Sbjct: 382 KYLLSKVELHSMPTPQKKKPKPKESKGFGILDGVVPVIAAQNAEASSINKQENDALLAAV 441
Query: 184 TKISKEAQKGIEVVDDPQNCEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAALIKES 363
++I + +K V D+PQ +
Sbjct: 442 SEIRNQHRKDYIVEDEPQ-----------------PLVDGGKSCKTWGKGRNKRGRANPQ 484
Query: 364 ESTSENAGKKVEINP-GEHTTIGGSVLKKHAEGAGVEQLRSGKRIPPVHFYAYESGQQVL 540
S +N +++I+ ++I VL++H + Q + K+IP VHFYA ES Q +L
Sbjct: 485 NSGEDNVNSELKISGYSRASSIEQGVLRRHTQQLDPLQ-SNAKQIPSVHFYAQESDQPIL 543
Query: 541 DILKPSAIVV 570
DILKPS I+V
Sbjct: 544 DILKPSVIIV 553
>ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1
[Medicago truncatula]
Length = 984
Score = 95.1 bits (235), Expect = 7e-18
Identities = 72/198 (36%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Frame = +1
Query: 10 KYLLSKVQLHALPKRNKKKPQNTKGFGVLDGMAPLTPGKRVEGSSLVTQEHDALLAAATK 189
KYLL+KVQL + + KKKP++ KGFG+L+G+ P++ + E + QEHDALLAAA+K
Sbjct: 456 KYLLNKVQLRDVVHK-KKKPKDPKGFGILNGVTPISLAQNTETGGINKQEHDALLAAASK 514
Query: 190 ISKEAQKGIEVVDDPQ-NCEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAALIKESE 366
+ A+K V D PQ + E K
Sbjct: 515 LRNLAEKNHVVEDTPQSDLGGHVRGKGKRKLGNRNGPIIIDGSGVQSNNKEEVTSGKTGM 574
Query: 367 STSENAGKKVEINPGE-----HTTIGG-----SVLKKHAEGAGVEQLRSGKRIPPVHFYA 516
S S+N E + T GG +VL++H + R GK +PPVHFYA
Sbjct: 575 SDSKNKAHMGETSAVSTDRVCETKHGGISVDDAVLRRHTFPDAM--ARDGKPLPPVHFYA 632
Query: 517 YESGQQVLDILKPSAIVV 570
ES Q +LDILKPS IVV
Sbjct: 633 LESDQPILDILKPSIIVV 650
>gb|AAF81910.1|AF277377_1 5' repair endonuclease [Arabidopsis thaliana]
Length = 956
Score = 92.4 bits (228), Expect = 5e-17
Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Frame = +1
Query: 13 YLLSKVQLHALPKRNKKKPQNTKGFGVLDGMAPLTPGKRVEGSSLVTQEHDALLAAATKI 192
YLLSK++L ++ KKK + KGFG+LDG+ P+T + EGSS+ QEH+AL+AAA+ I
Sbjct: 451 YLLSKIELRSMQTPQKKKQKTPKGFGILDGVVPVTTIQNSEGSSVGRQEHEALMAAASSI 510
Query: 193 SKEAQKGIEVVDDPQNCEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAALIKES--E 366
K K ++ N E + ++ S
Sbjct: 511 RK-LGKTTDMASGNNNPE----------------PHVDKASCTKGKAKKDLTSLQRSLRS 553
Query: 367 STSENAGKKVEINPG-EHTTIGGSVLKKHAEGAGVEQLRSGKRIPPVHFYAYESGQQVLD 543
+ A K EI PG E+ + A + K++PPVHFYA ES Q +LD
Sbjct: 554 CNKKTANSKPEILPGPENEEKANEASTSAPQEANAVRPSGAKKLPPVHFYALESDQPILD 613
Query: 544 ILKPSAIVV 570
ILKPS I+V
Sbjct: 614 ILKPSVIIV 622
>ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
Length = 964
Score = 92.4 bits (228), Expect = 5e-17
Identities = 65/189 (34%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Frame = +1
Query: 10 KYLLSKVQLHALPKRNKKKPQNTKGFGVLDGMAPLTPGKRVEGSSLVTQEHDALLAAATK 189
KYLLSKV+L L R K K + KGFG+L+G P T G+ E +S+ EHDAL+AAA+
Sbjct: 453 KYLLSKVELQGLQTRKKNKAKEPKGFGILNGEVPSTSGQNTEPTSISKLEHDALMAAASV 512
Query: 190 ISKEAQKGIEVVDDPQNCEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAALIKESES 369
IS A+K V D+ Q A+ + K + S
Sbjct: 513 ISL-AKKDTAVSDNSQ----------PHIGSGGRGKGRGKGRNIKITGKAQVSGHKVNNS 561
Query: 370 TSENA-GKKVEINPGEHTTIGGSVLKKHAEGAGVEQLRSGKRIPPVHFYAYESGQ-QVLD 543
SE K E+ E+ + G + KH + + K++P VHFYA ES + +LD
Sbjct: 562 NSEQGRNDKSEVFGSENDSQGKEIDPKHCQETDAPSFSNAKQLPLVHFYALESEKSNILD 621
Query: 544 ILKPSAIVV 570
+LKPS ++V
Sbjct: 622 VLKPSIVIV 630