BLASTX nr result

ID: Atractylodes21_contig00045613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045613
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92865.1| unknown [Populus trichocarpa]                          189   3e-46
ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15...   187   8e-46
ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
gb|ABK93072.1| unknown [Populus trichocarpa]                          184   7e-45
ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [C...   182   3e-44

>gb|ABK92865.1| unknown [Populus trichocarpa]
          Length = 168

 Score =  189 bits (479), Expect = 3e-46
 Identities = 84/129 (65%), Positives = 103/129 (79%)
 Frame = +3

Query: 102 DLTDEVHQLPCCIKYNGPSPVSHYFKPKPTGIEVDGLDVKEAYFRGRKLLGTTVPLPNDY 281
           +LT +VH LPCCIKY+GPS VSHYFKPKPTG+EV+ + V+EA+FRGRKL G T+P+PN Y
Sbjct: 26  NLTGKVHLLPCCIKYDGPSAVSHYFKPKPTGVEVEEMKVEEAHFRGRKLQGATLPIPNGY 85

Query: 282 SGFVIGRKSSAKRKAYDSDAETTASWKTNAKFQNITLWNHDNLPSKEDAFLRVFHWFDVA 461
           SGFVIG+KS  KRKA D   + + +W+  AKF+NIT WNHD+LPSK DAF+R  HW  VA
Sbjct: 86  SGFVIGKKSPGKRKASDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSVA 145

Query: 462 KALHKPVTA 488
           +ALHKP  A
Sbjct: 146 EALHKPAAA 154


>ref|XP_002276571.1| PREDICTED: uncharacterized protein C12B10.15c [Vitis vinifera]
           gi|297737975|emb|CBI27176.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/139 (62%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
 Frame = +3

Query: 75  VDLTSSSAI-DLTDEVHQLPCCIKYNGPSPVSHYFKPKPTGIEVDGLDVKEAYFRGRKLL 251
           +DL    A+ DLT  +HQLPCCIKYNGP  VSHYFKPK TGIEV+GL V+EA+FRGRKL 
Sbjct: 17  IDLCLGEAVVDLTGHIHQLPCCIKYNGPCSVSHYFKPKHTGIEVEGLKVEEAFFRGRKLQ 76

Query: 252 GTTVPLPNDYSGFVIGRKSSAKRKAYDSDAETTASWKTNAKFQNITLWNHDNLPSKEDAF 431
           GTT+ LP  YSGFV+G+KSS   K+  +       W+TNAKFQ IT WNHDNLPS++D++
Sbjct: 77  GTTIHLPEGYSGFVLGKKSSNTTKSTGTSEGNMNRWETNAKFQAITFWNHDNLPSQDDSY 136

Query: 432 LRVFHWFDVAKALHKPVTA 488
           +R FHW  V+KALHKP  A
Sbjct: 137 VRSFHWLAVSKALHKPAMA 155


>ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|222875186|gb|EEF12317.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  186 bits (471), Expect = 2e-45
 Identities = 83/129 (64%), Positives = 102/129 (79%)
 Frame = +3

Query: 102 DLTDEVHQLPCCIKYNGPSPVSHYFKPKPTGIEVDGLDVKEAYFRGRKLLGTTVPLPNDY 281
           +LT +VH LPCCIKY+GPS VSHYFKPKPTG+EV+ + V+EA+FRGRKL G T+ +PN Y
Sbjct: 26  NLTGKVHLLPCCIKYDGPSAVSHYFKPKPTGVEVEEMKVEEAHFRGRKLQGATLAIPNGY 85

Query: 282 SGFVIGRKSSAKRKAYDSDAETTASWKTNAKFQNITLWNHDNLPSKEDAFLRVFHWFDVA 461
           SGFVIG+KS  KRKA D   + + +W+  AKF+NIT WNHD+LPSK DAF+R  HW  VA
Sbjct: 86  SGFVIGKKSPGKRKASDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSVA 145

Query: 462 KALHKPVTA 488
           +ALHKP  A
Sbjct: 146 EALHKPAAA 154


>gb|ABK93072.1| unknown [Populus trichocarpa]
          Length = 168

 Score =  184 bits (467), Expect = 7e-45
 Identities = 82/129 (63%), Positives = 102/129 (79%)
 Frame = +3

Query: 102 DLTDEVHQLPCCIKYNGPSPVSHYFKPKPTGIEVDGLDVKEAYFRGRKLLGTTVPLPNDY 281
           +LT +VH LPCCIKY+GPS VSHYFKPKPTG+EV+ + V+EA+FRGRKL G T+ +PN Y
Sbjct: 26  NLTGKVHLLPCCIKYDGPSAVSHYFKPKPTGVEVEEMKVEEAHFRGRKLQGATLAIPNGY 85

Query: 282 SGFVIGRKSSAKRKAYDSDAETTASWKTNAKFQNITLWNHDNLPSKEDAFLRVFHWFDVA 461
           SGFVIG+KS  KRK+ D   + + +W+  AKF+NIT WNHD+LPSK DAF+R  HW  VA
Sbjct: 86  SGFVIGKKSLGKRKSSDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSVA 145

Query: 462 KALHKPVTA 488
           +ALHKP  A
Sbjct: 146 EALHKPAAA 154


>ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus]
          Length = 164

 Score =  182 bits (461), Expect = 3e-44
 Identities = 83/135 (61%), Positives = 102/135 (75%)
 Frame = +3

Query: 84  TSSSAIDLTDEVHQLPCCIKYNGPSPVSHYFKPKPTGIEVDGLDVKEAYFRGRKLLGTTV 263
           T   A+D++ +VHQLPC IK++GP PVSHYFKPK TGIEVDGL+++EAYFRGRKL G T+
Sbjct: 21  TDPKALDISGKVHQLPCTIKFDGPCPVSHYFKPKSTGIEVDGLNLEEAYFRGRKLQGATI 80

Query: 264 PLPNDYSGFVIGRKSSAKRKAYDSDAETTASWKTNAKFQNITLWNHDNLPSKEDAFLRVF 443
            LP  YSG+V+G+KS A +   DS     + W+  AKF NIT WNHD LPS++D F R F
Sbjct: 81  SLPEGYSGYVLGKKSKASKHCDDS-----SPWQVKAKFDNITYWNHDTLPSQDDTFQRTF 135

Query: 444 HWFDVAKALHKPVTA 488
           HW  VA+ALHKPVTA
Sbjct: 136 HWLTVAQALHKPVTA 150


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