BLASTX nr result

ID: Atractylodes21_contig00045601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045601
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...   145   3e-33
gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncat...   145   3e-33
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   142   3e-32
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   141   5e-32
ref|XP_002463949.1| hypothetical protein SORBIDRAFT_01g009436 [S...   140   8e-32

>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/94 (71%), Positives = 81/94 (86%)
 Frame = +1

Query: 4   DHAINLVPGYDPVCVRPYRYPQAHKTEIERQVRDLMSLGVIRPSNSAYSSPVILVRKKDH 183
           +HAI+L+ G  PV VRPYRYP  HKTEIE+QV++L+  GVIRPS SA+SSPVILV+KKD 
Sbjct: 320 EHAIHLLHGQGPVNVRPYRYPHHHKTEIEKQVKELLLSGVIRPSQSAFSSPVILVKKKDD 379

Query: 184 TWCMCVDYRALNKATVPDKYPIPVVDELIDELSG 285
           +W MCVDYRALNK T+PDK+PIPV+DEL+DEL G
Sbjct: 380 SWRMCVDYRALNKVTIPDKFPIPVIDELLDELHG 413


>gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/94 (71%), Positives = 81/94 (86%)
 Frame = +1

Query: 4   DHAINLVPGYDPVCVRPYRYPQAHKTEIERQVRDLMSLGVIRPSNSAYSSPVILVRKKDH 183
           +HAI+L+ G  PV VRPYRYP  HKTEIE+QV++L+  GVIRPS SA+SSPVILV+KKD 
Sbjct: 320 EHAIHLLHGQGPVNVRPYRYPHHHKTEIEKQVKELLLSGVIRPSQSAFSSPVILVKKKDD 379

Query: 184 TWCMCVDYRALNKATVPDKYPIPVVDELIDELSG 285
           +W MCVDYRALNK T+PDK+PIPV+DEL+DEL G
Sbjct: 380 SWRMCVDYRALNKVTIPDKFPIPVIDELLDELHG 413


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/101 (63%), Positives = 83/101 (82%)
 Frame = +1

Query: 4   DHAINLVPGYDPVCVRPYRYPQAHKTEIERQVRDLMSLGVIRPSNSAYSSPVILVRKKDH 183
           +H I L  G   V VRPYRYP  HK EIE+QVR+++  G+IR S S++SSPVILV++KD+
Sbjct: 371 EHVITLKEGEGAVNVRPYRYPHHHKNEIEKQVREMLQAGIIRHSTSSFSSPVILVKEKDN 430

Query: 184 TWCMCVDYRALNKATVPDKYPIPVVDELIDELSGTQFFSKL 306
           +W MC+DYRALNKATVPDK+PIPV++EL+DEL G +F+SKL
Sbjct: 431 SWRMCIDYRALNKATVPDKFPIPVIEELLDELHGARFYSKL 471


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/102 (64%), Positives = 82/102 (80%)
 Frame = +1

Query: 1   NDHAINLVPGYDPVCVRPYRYPQAHKTEIERQVRDLMSLGVIRPSNSAYSSPVILVRKKD 180
           ++HAI L  G +PV VRPYRYPQ  K EIER ++++++ G+I+PS S +SSPVILV+KKD
Sbjct: 679 HEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIKEMLAAGIIQPSTSPFSSPVILVKKKD 738

Query: 181 HTWCMCVDYRALNKATVPDKYPIPVVDELIDELSGTQFFSKL 306
            +W  CVDYRALNK TVPDKYPIPV+DEL+DEL G   FSKL
Sbjct: 739 GSWRFCVDYRALNKETVPDKYPIPVIDELLDELHGATVFSKL 780


>ref|XP_002463949.1| hypothetical protein SORBIDRAFT_01g009436 [Sorghum bicolor]
           gi|241917803|gb|EER90947.1| hypothetical protein
           SORBIDRAFT_01g009436 [Sorghum bicolor]
          Length = 1450

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/101 (63%), Positives = 78/101 (77%)
 Frame = +1

Query: 4   DHAINLVPGYDPVCVRPYRYPQAHKTEIERQVRDLMSLGVIRPSNSAYSSPVILVRKKDH 183
           DHAINL  G  PV VRPYRYP AHK E+E+Q   ++  G+IR S+SA+SSPV+LVRK D 
Sbjct: 572 DHAINLKAGAQPVAVRPYRYPAAHKDELEKQCATMLQQGIIRRSDSAFSSPVLLVRKADG 631

Query: 184 TWCMCVDYRALNKATVPDKYPIPVVDELIDELSGTQFFSKL 306
            WC C+DYRALN  T+ D +PIPVVDEL+DEL G +FF+KL
Sbjct: 632 GWCFCIDYRALNALTIKDAFPIPVVDELLDELHGARFFTKL 672


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