BLASTX nr result

ID: Atractylodes21_contig00045538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045538
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266048.2| PREDICTED: katanin p80 WD40 repeat-containin...   153   1e-35
emb|CBI38493.3| unnamed protein product [Vitis vinifera]              153   1e-35
ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containin...   150   8e-35
ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containin...   148   4e-34
ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus commu...   148   4e-34

>ref|XP_002266048.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Vitis vinifera]
          Length = 545

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/78 (88%), Positives = 72/78 (92%)
 Frame = -3

Query: 235 EETKVVRTLNGHRSYCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHKRAIST 56
           EE K+VRTL GHRS CTAVEFHPFGEFFASGS+DTNLK+WDIRKKGCIHTYKGH R IST
Sbjct: 99  EEAKMVRTLTGHRSNCTAVEFHPFGEFFASGSLDTNLKVWDIRKKGCIHTYKGHTRGIST 158

Query: 55  IRFTPDGRWVVSGGLDNV 2
           IRFTPDGRWVVSGG DNV
Sbjct: 159 IRFTPDGRWVVSGGFDNV 176


>emb|CBI38493.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  153 bits (387), Expect = 1e-35
 Identities = 69/78 (88%), Positives = 72/78 (92%)
 Frame = -3

Query: 235 EETKVVRTLNGHRSYCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHKRAIST 56
           EE K+VRTL GHRS CTAVEFHPFGEFFASGS+DTNLK+WDIRKKGCIHTYKGH R IST
Sbjct: 88  EEAKMVRTLTGHRSNCTAVEFHPFGEFFASGSLDTNLKVWDIRKKGCIHTYKGHTRGIST 147

Query: 55  IRFTPDGRWVVSGGLDNV 2
           IRFTPDGRWVVSGG DNV
Sbjct: 148 IRFTPDGRWVVSGGFDNV 165


>ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 825

 Score =  150 bits (380), Expect = 8e-35
 Identities = 68/78 (87%), Positives = 72/78 (92%)
 Frame = -3

Query: 235 EETKVVRTLNGHRSYCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHKRAIST 56
           EE K+VRT+ GHRS CTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGH + IST
Sbjct: 88  EEAKMVRTVAGHRSNCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHSQGIST 147

Query: 55  IRFTPDGRWVVSGGLDNV 2
           I+FTPDGRWVVSGG DNV
Sbjct: 148 IKFTPDGRWVVSGGFDNV 165


>ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Glycine max]
          Length = 824

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/78 (85%), Positives = 71/78 (91%)
 Frame = -3

Query: 235 EETKVVRTLNGHRSYCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHKRAIST 56
           EE K+VRT+ GHRS CTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGH + IS 
Sbjct: 88  EEAKMVRTVAGHRSNCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHSQGISI 147

Query: 55  IRFTPDGRWVVSGGLDNV 2
           I+FTPDGRWVVSGG DNV
Sbjct: 148 IKFTPDGRWVVSGGFDNV 165


>ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus communis]
           gi|223539311|gb|EEF40902.1| katanin P80 subunit,
           putative [Ricinus communis]
          Length = 936

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/78 (85%), Positives = 71/78 (91%)
 Frame = -3

Query: 235 EETKVVRTLNGHRSYCTAVEFHPFGEFFASGSMDTNLKIWDIRKKGCIHTYKGHKRAIST 56
           EE K+VRTL GHRS CTA+EFHPFGEFFASGS DTNLK+WDIRKKG +HTYKGH R IST
Sbjct: 99  EEAKMVRTLTGHRSNCTAIEFHPFGEFFASGSADTNLKLWDIRKKGTLHTYKGHTRGIST 158

Query: 55  IRFTPDGRWVVSGGLDNV 2
           IRFTPDGRWVVSGGLDNV
Sbjct: 159 IRFTPDGRWVVSGGLDNV 176


Top