BLASTX nr result
ID: Atractylodes21_contig00045481
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00045481 (338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 55 2e-09 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 50 5e-09 gb|AAF79677.1|AC022314_18 F9C16.26 [Arabidopsis thaliana] 50 3e-08 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 52 2e-07 gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 50 4e-07 >gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] Length = 1213 Score = 55.1 bits (131), Expect(2) = 2e-09 Identities = 24/67 (35%), Positives = 37/67 (55%) Frame = -1 Query: 212 FVSKRNSVWVKWLHIYKLNKSNFWRVMPVRSSSWMWXXXXXLHDRFRDNFVNKIGDGCIT 33 FV+K +S+W W H++ L++ +FW V +S SW W L V K+G+G Sbjct: 888 FVAK-DSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKA 946 Query: 32 NAWFDNW 12 + W+DNW Sbjct: 947 DYWYDNW 953 Score = 31.2 bits (69), Expect(2) = 2e-09 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -2 Query: 286 GGLALRRVSKWNQVLLLKQIWNI 218 GGL LRR+ +WN+ L ++ IW + Sbjct: 865 GGLGLRRLLEWNKTLSMRLIWRL 887 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 50.1 bits (118), Expect(2) = 5e-09 Identities = 22/63 (34%), Positives = 28/63 (44%) Frame = -1 Query: 194 SVWVKWLHIYKLNKSNFWRVMPVRSSSWMWXXXXXLHDRFRDNFVNKIGDGCITNAWFDN 15 S+W W+ L NFW + ++ SW W L IGDG T+ WFDN Sbjct: 188 SIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDN 247 Query: 14 WLP 6 W P Sbjct: 248 WHP 250 Score = 35.0 bits (79), Expect(2) = 5e-09 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = -2 Query: 286 GGLALRRVSKWNQVLLLKQIWNI 218 GGL ++ + +WN++ LLK IWN+ Sbjct: 159 GGLGIKSIKEWNKIALLKHIWNL 181 >gb|AAF79677.1|AC022314_18 F9C16.26 [Arabidopsis thaliana] Length = 1902 Score = 49.7 bits (117), Expect(2) = 3e-08 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -1 Query: 197 NSVWVKWLHIYKLNKSNFWRVMPVRSSSWMWXXXXXLHDRFRDNFVNKIGDGCITNAWFD 18 +S+WV W+ + + NFW + P S SW+ L R V ++G G N W D Sbjct: 1584 SSLWVSWVRVNLIRNKNFWYLNPSFSGSWILRRLCKLRTLARPFIVCEVGSGVTANFWLD 1643 Query: 17 NW 12 NW Sbjct: 1644 NW 1645 Score = 32.7 bits (73), Expect(2) = 3e-08 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -2 Query: 292 IYGGLALRRVSKWNQVLLLKQIWNIVT 212 + GGL LR + WN+VL LK IW + T Sbjct: 1555 VCGGLGLRDLVAWNKVLALKLIWMLFT 1581 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 52.0 bits (123), Expect(2) = 2e-07 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 209 VSKRNSVWVKWLHIYKLNKSNFWRV-MPVRSSSWMWXXXXXLHDRFRDNFVNKIGDGCIT 33 VS NS+WVKW+ + L ++FW V V SW+W + + ++G+G T Sbjct: 895 VSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQT 954 Query: 32 NAWFDNW 12 + W+DNW Sbjct: 955 SFWYDNW 961 Score = 28.1 bits (61), Expect(2) = 2e-07 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 286 GGLALRRVSKWNQVLLLKQIWNIVT 212 GGL LR + + N V LK +W IV+ Sbjct: 872 GGLGLRSLKEANDVCCLKLVWKIVS 896 >gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1352 Score = 50.4 bits (119), Expect(2) = 4e-07 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = -1 Query: 209 VSKRNSVWVKWLHIYKLNKSNFWRVMP-VRSSSWMWXXXXXLHDRFRDNFVNKIGDGCIT 33 +S R+S+WVKW++ + + K FW V SW+W D+ R ++ G T Sbjct: 1042 LSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWLWRKILKQRDKARLFHRMEVRSGTFT 1101 Query: 32 NAWFDNWLP 6 + W D+W P Sbjct: 1102 SFWHDHWCP 1110 Score = 28.1 bits (61), Expect(2) = 4e-07 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -2 Query: 286 GGLALRRVSKWNQVLLLKQIWNIVT 212 GGL L+ + + N+V LLK IW I++ Sbjct: 1019 GGLGLKPLKEANEVSLLKLIWRILS 1043