BLASTX nr result

ID: Atractylodes21_contig00045481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045481
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        55   2e-09
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    50   5e-09
gb|AAF79677.1|AC022314_18 F9C16.26 [Arabidopsis thaliana]              50   3e-08
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    52   2e-07
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    50   4e-07

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 55.1 bits (131), Expect(2) = 2e-09
 Identities = 24/67 (35%), Positives = 37/67 (55%)
 Frame = -1

Query: 212  FVSKRNSVWVKWLHIYKLNKSNFWRVMPVRSSSWMWXXXXXLHDRFRDNFVNKIGDGCIT 33
            FV+K +S+W  W H++ L++ +FW V   +S SW W     L        V K+G+G   
Sbjct: 888  FVAK-DSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKA 946

Query: 32   NAWFDNW 12
            + W+DNW
Sbjct: 947  DYWYDNW 953



 Score = 31.2 bits (69), Expect(2) = 2e-09
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 286 GGLALRRVSKWNQVLLLKQIWNI 218
           GGL LRR+ +WN+ L ++ IW +
Sbjct: 865 GGLGLRRLLEWNKTLSMRLIWRL 887


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 50.1 bits (118), Expect(2) = 5e-09
 Identities = 22/63 (34%), Positives = 28/63 (44%)
 Frame = -1

Query: 194 SVWVKWLHIYKLNKSNFWRVMPVRSSSWMWXXXXXLHDRFRDNFVNKIGDGCITNAWFDN 15
           S+W  W+    L   NFW +   ++ SW W     L           IGDG  T+ WFDN
Sbjct: 188 SIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDN 247

Query: 14  WLP 6
           W P
Sbjct: 248 WHP 250



 Score = 35.0 bits (79), Expect(2) = 5e-09
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 286 GGLALRRVSKWNQVLLLKQIWNI 218
           GGL ++ + +WN++ LLK IWN+
Sbjct: 159 GGLGIKSIKEWNKIALLKHIWNL 181


>gb|AAF79677.1|AC022314_18 F9C16.26 [Arabidopsis thaliana]
          Length = 1902

 Score = 49.7 bits (117), Expect(2) = 3e-08
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = -1

Query: 197  NSVWVKWLHIYKLNKSNFWRVMPVRSSSWMWXXXXXLHDRFRDNFVNKIGDGCITNAWFD 18
            +S+WV W+ +  +   NFW + P  S SW+      L    R   V ++G G   N W D
Sbjct: 1584 SSLWVSWVRVNLIRNKNFWYLNPSFSGSWILRRLCKLRTLARPFIVCEVGSGVTANFWLD 1643

Query: 17   NW 12
            NW
Sbjct: 1644 NW 1645



 Score = 32.7 bits (73), Expect(2) = 3e-08
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -2

Query: 292  IYGGLALRRVSKWNQVLLLKQIWNIVT 212
            + GGL LR +  WN+VL LK IW + T
Sbjct: 1555 VCGGLGLRDLVAWNKVLALKLIWMLFT 1581


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 52.0 bits (123), Expect(2) = 2e-07
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 209  VSKRNSVWVKWLHIYKLNKSNFWRV-MPVRSSSWMWXXXXXLHDRFRDNFVNKIGDGCIT 33
            VS  NS+WVKW+  + L  ++FW V   V   SW+W       +  +     ++G+G  T
Sbjct: 895  VSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQT 954

Query: 32   NAWFDNW 12
            + W+DNW
Sbjct: 955  SFWYDNW 961



 Score = 28.1 bits (61), Expect(2) = 2e-07
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 286 GGLALRRVSKWNQVLLLKQIWNIVT 212
           GGL LR + + N V  LK +W IV+
Sbjct: 872 GGLGLRSLKEANDVCCLKLVWKIVS 896


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 50.4 bits (119), Expect(2) = 4e-07
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -1

Query: 209  VSKRNSVWVKWLHIYKLNKSNFWRVMP-VRSSSWMWXXXXXLHDRFRDNFVNKIGDGCIT 33
            +S R+S+WVKW++ + + K  FW V       SW+W       D+ R     ++  G  T
Sbjct: 1042 LSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWLWRKILKQRDKARLFHRMEVRSGTFT 1101

Query: 32   NAWFDNWLP 6
            + W D+W P
Sbjct: 1102 SFWHDHWCP 1110



 Score = 28.1 bits (61), Expect(2) = 4e-07
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 286  GGLALRRVSKWNQVLLLKQIWNIVT 212
            GGL L+ + + N+V LLK IW I++
Sbjct: 1019 GGLGLKPLKEANEVSLLKLIWRILS 1043


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