BLASTX nr result

ID: Atractylodes21_contig00045472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045472
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat...   130   1e-28
emb|CBI27286.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat...   128   4e-28
ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago ...   126   2e-27
ref|NP_173972.1| pentatricopeptide repeat-containing protein [Ar...   121   5e-26

>ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Glycine max]
          Length = 494

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/94 (61%), Positives = 77/94 (81%), Gaps = 1/94 (1%)
 Frame = -1

Query: 281 LNTTHNPLTPVNPSHLLRVCTILYQQQDSPESRLYTSLSRCDFQLTHEFFLQICNKFPYS 102
           L   H+ ++PVNP HLLRVCTILYQQQ+SPE RL + L+  +FQLTHEFFLQ+CNKFPYS
Sbjct: 21  LRRHHHHISPVNPDHLLRVCTILYQQQNSPEPRLTSKLASSEFQLTHEFFLQVCNKFPYS 80

Query: 101 WKPVFKFHKFSQT-QTFTHTSITLNRMLDVVGKA 3
           W+PV++F  ++Q+   FTH+ ++ N+MLDVVGK+
Sbjct: 81  WRPVYRFFLYTQSLPHFTHSPVSFNKMLDVVGKS 114


>emb|CBI27286.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  128 bits (322), Expect = 4e-28
 Identities = 56/88 (63%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
 Frame = -1

Query: 263 PLTPVNPSHLLRVCTILYQQQDSPESRLYTSLSRCDFQLTHEFFLQICNKFPYSWKPVFK 84
           P + VNP+HLLRVCT+LYQQQ+SPE RL T L  C+F LTHEFFLQ+CNKFP SW+PV+K
Sbjct: 30  PTSIVNPNHLLRVCTVLYQQQNSPEVRLQTHLRACEFHLTHEFFLQVCNKFPLSWRPVYK 89

Query: 83  FHKFSQTQ-TFTHTSITLNRMLDVVGKA 3
           F +F++TQ  F H S+T N+M+DV+G++
Sbjct: 90  FFEFTETQPCFHHNSVTFNKMVDVIGRS 117


>ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Vitis vinifera]
          Length = 525

 Score =  128 bits (322), Expect = 4e-28
 Identities = 56/88 (63%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
 Frame = -1

Query: 263 PLTPVNPSHLLRVCTILYQQQDSPESRLYTSLSRCDFQLTHEFFLQICNKFPYSWKPVFK 84
           P + VNP+HLLRVCT+LYQQQ+SPE RL T L  C+F LTHEFFLQ+CNKFP SW+PV+K
Sbjct: 32  PTSIVNPNHLLRVCTVLYQQQNSPEVRLQTHLRACEFHLTHEFFLQVCNKFPLSWRPVYK 91

Query: 83  FHKFSQTQ-TFTHTSITLNRMLDVVGKA 3
           F +F++TQ  F H S+T N+M+DV+G++
Sbjct: 92  FFEFTETQPCFHHNSVTFNKMVDVIGRS 119


>ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago truncatula]
           gi|355515382|gb|AES97005.1| hypothetical protein
           MTR_5g044120 [Medicago truncatula]
          Length = 507

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/93 (60%), Positives = 75/93 (80%), Gaps = 3/93 (3%)
 Frame = -1

Query: 272 THNPLTPVNPSHLLRVCTILYQQQDSPESRLYTSLSRCDFQLTHEFFLQICNKFPYSWKP 93
           T NP+TPVN   LL+VCTILYQQQ+SP+SRL++ L+  +F LTHEFFLQ+CN FPYSW+P
Sbjct: 25  TTNPITPVNREELLKVCTILYQQQNSPDSRLHSKLTSSNFNLTHEFFLQVCNNFPYSWRP 84

Query: 92  VFKFHKFSQTQ---TFTHTSITLNRMLDVVGKA 3
           V++F  F+Q +   +FTHT ++ N+MLDVV K+
Sbjct: 85  VYRFFLFTQQEKNSSFTHTHVSFNKMLDVVAKS 117


>ref|NP_173972.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75263259|sp|Q9FZD4.1|PPR59_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g26500 gi|9797751|gb|AAF98569.1|AC013427_12
           Contains similarity to a hypothetical protein T12C14_170
           gi|7340718 from Arabidopsis thaliana BAC T12C14
           gb|AL162507 and contains multiple PPR PF|01535 repeats
           [Arabidopsis thaliana] gi|332192576|gb|AEE30697.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 505

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 2/96 (2%)
 Frame = -1

Query: 284 SLNTTHNPLTPVNPSHLLRVCTILYQQQDSPESRLYTSLSRCDFQLTHEFFLQICNKFPY 105
           S   T   +TP+N  HLLRVCTILYQQQ+SP+SRL + LS   FQLTHEFFLQ+CN FP 
Sbjct: 30  STELTPTTITPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPL 89

Query: 104 SWKPVFKFHKFSQTQ--TFTHTSITLNRMLDVVGKA 3
           SW+PV +F  +SQT    FTHTS T N+ML ++G +
Sbjct: 90  SWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNS 125


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