BLASTX nr result

ID: Atractylodes21_contig00045407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045407
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]           175   4e-42
ref|XP_002268669.2| PREDICTED: uncharacterized protein LOC100256...   172   3e-41
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   171   6e-41
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]                 171   6e-41
ref|XP_004153733.1| PREDICTED: uncharacterized protein LOC101205...   169   2e-40

>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
          Length = 1554

 Score =  175 bits (443), Expect = 4e-42
 Identities = 81/96 (84%), Positives = 92/96 (95%)
 Frame = -2

Query: 289  YSMAPSEMKELKEQIQDLLDQGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNSLTIR 110
            Y MAPSE+KELKEQ++DLLD+GFIRPSVSPWGAPVLFV+KKDGSLR+CIDYR+LN +TI+
Sbjct: 749  YRMAPSELKELKEQLKDLLDKGFIRPSVSPWGAPVLFVRKKDGSLRMCIDYRQLNKVTIK 808

Query: 109  NKYPLPRIDDLFDQLQGAQYFSKIDLRSGYHQLRIR 2
            NKYPLPRIDDLF+QLQGA  FSKIDLRSGYHQLR+R
Sbjct: 809  NKYPLPRIDDLFNQLQGATCFSKIDLRSGYHQLRVR 844


>ref|XP_002268669.2| PREDICTED: uncharacterized protein LOC100256661 [Vitis vinifera]
          Length = 1855

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/96 (84%), Positives = 89/96 (92%)
 Frame = -2

Query: 289  YSMAPSEMKELKEQIQDLLDQGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNSLTIR 110
            Y MAP E+KELK Q+Q+LLD+GFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELN +T+R
Sbjct: 1585 YRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVR 1644

Query: 109  NKYPLPRIDDLFDQLQGAQYFSKIDLRSGYHQLRIR 2
            NKYPLPRIDDLFDQLQGA  FSKIDL SGYHQLR+R
Sbjct: 1645 NKYPLPRIDDLFDQLQGACMFSKIDLPSGYHQLRVR 1680


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/95 (83%), Positives = 90/95 (94%)
 Frame = -2

Query: 289 YSMAPSEMKELKEQIQDLLDQGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNSLTIR 110
           Y MAP+EM ELK Q+++LLD+G+IRPS+SPWGAPVLFVKKKDGSLRLCIDYRELN++T++
Sbjct: 598 YRMAPAEMNELKNQLEELLDKGYIRPSMSPWGAPVLFVKKKDGSLRLCIDYRELNNVTVK 657

Query: 109 NKYPLPRIDDLFDQLQGAQYFSKIDLRSGYHQLRI 5
           NKYPLPRIDDLFDQLQGA  FSKIDLRSGYHQLRI
Sbjct: 658 NKYPLPRIDDLFDQLQGAGMFSKIDLRSGYHQLRI 692


>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
          Length = 923

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/94 (84%), Positives = 90/94 (95%)
 Frame = -2

Query: 283 MAPSEMKELKEQIQDLLDQGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNSLTIRNK 104
           MAP+E+KELK Q+Q+LLD+GFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELN +T++N+
Sbjct: 1   MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 60

Query: 103 YPLPRIDDLFDQLQGAQYFSKIDLRSGYHQLRIR 2
           YPLPRIDDLFDQLQGA  FSKIDLRSGYHQLRI+
Sbjct: 61  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIK 94


>ref|XP_004153733.1| PREDICTED: uncharacterized protein LOC101205308, partial [Cucumis
           sativus]
          Length = 768

 Score =  169 bits (428), Expect = 2e-40
 Identities = 81/96 (84%), Positives = 89/96 (92%)
 Frame = -2

Query: 289 YSMAPSEMKELKEQIQDLLDQGFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRELNSLTIR 110
           Y MA +E+KELK Q+Q+LLD+GFIRPSVSPWGAPVLFVKKKDGS+RLCIDYRELN +TI+
Sbjct: 539 YRMALAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTIK 598

Query: 109 NKYPLPRIDDLFDQLQGAQYFSKIDLRSGYHQLRIR 2
           N YPLPRIDDLFDQLQGA  FSKIDLRSGYHQLRIR
Sbjct: 599 NIYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIR 634


Top