BLASTX nr result

ID: Atractylodes21_contig00045354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045354
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...   114   6e-25
gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H...   113   2e-23
emb|CAH66146.1| OSIGBa0114M03.4 [Oryza sativa Indica Group]           112   2e-23
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   111   5e-23
ref|XP_002438460.1| hypothetical protein SORBIDRAFT_10g020018 [S...   109   3e-22

>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  114 bits (285), Expect(2) = 6e-25
 Identities = 51/81 (62%), Positives = 60/81 (74%)
 Frame = -3

Query: 245  GHIIDGRGVSMDPFKISAVMNWPTPKSVKAVRGFLGLTGYYRKFIQGYGKVARPLTELTK 66
            GHII   GV+ D  K   +  WP PKSVK +RGFLGLTGYYR +++GYG +ARPLTEL K
Sbjct: 1986 GHIISKNGVATDAIKTQCMKEWPLPKSVKQLRGFLGLTGYYRHYVKGYGSIARPLTELLK 2045

Query: 65   KDGFHWGPPAQLAFDTLKKLM 3
            KDGF W   A+LAFD+LKK M
Sbjct: 2046 KDGFQWSKEAELAFDSLKKAM 2066



 Score = 24.6 bits (52), Expect(2) = 6e-25
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 291  NKKRSIFGKQSVEYLG 244
            N+K+  FG Q +EYLG
Sbjct: 1971 NRKKCSFGLQQIEYLG 1986


>gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 657

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/78 (66%), Positives = 60/78 (76%)
 Frame = -3

Query: 245 GHIIDGRGVSMDPFKISAVMNWPTPKSVKAVRGFLGLTGYYRKFIQGYGKVARPLTELTK 66
           G II   GV+MDP KI  V+ WP PK VK VRGFLGLT YYRKFI+ YGK+A+PLTELTK
Sbjct: 67  GPIISHEGVAMDPAKIKCVLQWPVPKHVKGVRGFLGLTSYYRKFIKDYGKLAKPLTELTK 126

Query: 65  KDGFHWGPPAQLAFDTLK 12
           K+GF WG   Q+AF+ LK
Sbjct: 127 KEGFMWGAQEQVAFEVLK 144


>emb|CAH66146.1| OSIGBa0114M03.4 [Oryza sativa Indica Group]
          Length = 1448

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/91 (59%), Positives = 65/91 (71%)
 Frame = -3

Query: 284 KGAFSASNRSSTWGHIIDGRGVSMDPFKISAVMNWPTPKSVKAVRGFLGLTGYYRKFIQG 105
           K AF AS+ S   GH+I   GV+MDP K+ A+++WP P+SV+AVRGFLGL GYYRKF+  
Sbjct: 700 KCAFGASSVSYL-GHVISAAGVAMDPTKVQAILDWPAPRSVRAVRGFLGLAGYYRKFVHN 758

Query: 104 YGKVARPLTELTKKDGFHWGPPAQLAFDTLK 12
           YG VA PLT L KKDGF W   A  AF+ LK
Sbjct: 759 YGTVAAPLTALLKKDGFSWDDAAATAFNALK 789


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/93 (55%), Positives = 63/93 (67%)
 Frame = -3

Query: 287 KKGAFSASNRSSTWGHIIDGRGVSMDPFKISAVMNWPTPKSVKAVRGFLGLTGYYRKFIQ 108
           KK  +         GH+I   GV++DP K+ +V  WP PK+VK VRGFLGLT YYRKFI+
Sbjct: 568 KKKCYFGQETVEYLGHLISKEGVAVDPSKVVSVTRWPIPKNVKGVRGFLGLTDYYRKFIK 627

Query: 107 GYGKVARPLTELTKKDGFHWGPPAQLAFDTLKK 9
            YGK+A+PLTELTKKD F W    Q AFD LK+
Sbjct: 628 DYGKIAKPLTELTKKDAFMWNEKTQDAFDQLKR 660


>ref|XP_002438460.1| hypothetical protein SORBIDRAFT_10g020018 [Sorghum bicolor]
           gi|241916683|gb|EER89827.1| hypothetical protein
           SORBIDRAFT_10g020018 [Sorghum bicolor]
          Length = 1437

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/91 (56%), Positives = 64/91 (70%)
 Frame = -3

Query: 284 KGAFSASNRSSTWGHIIDGRGVSMDPFKISAVMNWPTPKSVKAVRGFLGLTGYYRKFIQG 105
           K AF+A++ +   GH++   GV+MDP K+ AV +WP P+S +AVRGFLGL GYYRKF+  
Sbjct: 698 KCAFAAASVAYL-GHVVSAAGVAMDPAKLQAVRDWPQPRSARAVRGFLGLAGYYRKFVHN 756

Query: 104 YGKVARPLTELTKKDGFHWGPPAQLAFDTLK 12
           YG +A PLT L KKDGF W   A  AFD LK
Sbjct: 757 YGTIAAPLTALLKKDGFSWSAEAAAAFDALK 787


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