BLASTX nr result

ID: Atractylodes21_contig00045334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045334
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]   159   2e-37
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...   155   2e-36
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...   154   5e-36
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   154   9e-36
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]   153   2e-35

>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score =  159 bits (402), Expect = 2e-37
 Identities = 74/127 (58%), Positives = 94/127 (74%)
 Frame = +2

Query: 5   SCVERPQQNSIVERKHQHLLNVARALFFQSNVPSIYWSECVLATNFLINITTSRAIGNCS 184
           SCVE PQQNS+VERKHQH+LNVARAL F S++P  YWS+C+L   +LIN T S  + N +
Sbjct: 560 SCVETPQQNSVVERKHQHILNVARALLFXSSLPVCYWSDCILTAVYLINRTPSPFLNNKT 619

Query: 185 PYQKSYGKVPDYSQFRTFGCLAFASTLQAHRTKFQSLARHCMFLGYPPGMKAYKLLDLET 364
           P++  + K+PDYS  R FGCL + STL+A+RTKF   A+  +FLGYP G K YKLLD+ET
Sbjct: 620 PFEILHDKLPDYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIET 679

Query: 365 RQVFTSR 385
           R +  SR
Sbjct: 680 RSISISR 686


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
            gi|7268152|emb|CAB78488.1| retrovirus-related like
            polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/128 (59%), Positives = 86/128 (67%)
 Frame = +2

Query: 2    FSCVERPQQNSIVERKHQHLLNVARALFFQSNVPSIYWSECVLATNFLINITTSRAIGNC 181
            FSC   PQQNS+VERKHQH+LNVARAL FQSN+P  YWS+CV    FLIN   S  + N 
Sbjct: 722  FSCAYTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNK 781

Query: 182  SPYQKSYGKVPDYSQFRTFGCLAFASTLQAHRTKFQSLARHCMFLGYPPGMKAYKLLDLE 361
            SPY+    K PDYS  + FGCL F ST    RTKF   AR C+FLGYP G K YK+LDLE
Sbjct: 782  SPYELILNKQPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLE 841

Query: 362  TRQVFTSR 385
            +  V  SR
Sbjct: 842  SHSVTVSR 849


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score =  154 bits (390), Expect = 5e-36
 Identities = 74/127 (58%), Positives = 87/127 (68%)
 Frame = +2

Query: 5    SCVERPQQNSIVERKHQHLLNVARALFFQSNVPSIYWSECVLATNFLINITTSRAIGNCS 184
            SC E  +QNS++ERKHQHLLNVARAL FQS VP  YW +CVL   FLIN T S  + N S
Sbjct: 664  SCPETLEQNSVLERKHQHLLNVARALMFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKS 723

Query: 185  PYQKSYGKVPDYSQFRTFGCLAFASTLQAHRTKFQSLARHCMFLGYPPGMKAYKLLDLET 364
            PY+   GK P Y Q RTFGCL + ST    R KF   +R C+FLGYP G K YKLLDLE+
Sbjct: 724  PYEVLMGKAPQYDQLRTFGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLES 783

Query: 365  RQVFTSR 385
             +++ SR
Sbjct: 784  NKIYISR 790


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/127 (58%), Positives = 90/127 (70%)
 Frame = +2

Query: 5    SCVERPQQNSIVERKHQHLLNVARALFFQSNVPSIYWSECVLATNFLINITTSRAIGNCS 184
            SC E P+QNS+VERKHQH+LNVARAL FQSN+   YW +CVL   FLIN T S  + N +
Sbjct: 715  SCPETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKT 774

Query: 185  PYQKSYGKVPDYSQFRTFGCLAFASTLQAHRTKFQSLARHCMFLGYPPGMKAYKLLDLET 364
            P++   GK+PDYSQ +TFGCL ++ST    R KF   +R C+FLGYP G K YKLLDLE+
Sbjct: 775  PFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLES 834

Query: 365  RQVFTSR 385
              V  SR
Sbjct: 835  NVVHISR 841


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/127 (57%), Positives = 89/127 (70%)
 Frame = +2

Query: 5    SCVERPQQNSIVERKHQHLLNVARALFFQSNVPSIYWSECVLATNFLINITTSRAIGNCS 184
            SCVE P QN  VERKHQHLLNVAR+L FQS +P  YW++CVL    LIN T S  + N +
Sbjct: 653  SCVETPXQNGRVERKHQHLLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSSILNNQT 712

Query: 185  PYQKSYGKVPDYSQFRTFGCLAFASTLQAHRTKFQSLARHCMFLGYPPGMKAYKLLDLET 364
            PYQ  + K P+Y+ F+ FGCL FAST+  +R KFQ  A  C+FLGYPP +K YK+LDL T
Sbjct: 713  PYQLLFQKPPNYNYFKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLDLTT 772

Query: 365  RQVFTSR 385
             + F SR
Sbjct: 773  XKXFVSR 779


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