BLASTX nr result

ID: Atractylodes21_contig00045292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045292
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331925.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]   137   7e-31
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   126   2e-27
ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat...   124   8e-27

>ref|XP_002331925.1| predicted protein [Populus trichocarpa] gi|222874597|gb|EEF11728.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/103 (64%), Positives = 84/103 (81%)
 Frame = -2

Query: 310 EITFLSVLSACGHGGLIREGQSLFDMMVHQYGFKPTIKHYGCMVDLLCRGGHLDEALELI 131
           ++TFL VLS C H GL+ E   LF+ M+  YGF+P I+HYGCMVDLLCR G L+EA ELI
Sbjct: 336 DVTFLLVLSGCSHSGLLVEANKLFNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEAKELI 395

Query: 130 ERMPLEPDAVIWRSVLSACMIKRDLQLAEIAAKRVLELEPYDD 2
           + MP++PDAVIWRS+LSACM +R+L LAEIA K+++ELEP+DD
Sbjct: 396 DNMPMDPDAVIWRSLLSACMNQRNLGLAEIAGKKIIELEPHDD 438


>ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
           gi|297742795|emb|CBI35475.3| unnamed protein product
           [Vitis vinifera]
          Length = 517

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/103 (64%), Positives = 81/103 (78%)
 Frame = -2

Query: 310 EITFLSVLSACGHGGLIREGQSLFDMMVHQYGFKPTIKHYGCMVDLLCRGGHLDEALELI 131
           E+T LSVLSAC H GL+ EG+SLF  MV  +G KP I+HYGCMVDLL R G L EA ELI
Sbjct: 337 EVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELI 396

Query: 130 ERMPLEPDAVIWRSVLSACMIKRDLQLAEIAAKRVLELEPYDD 2
           E MP++PD+VIWRS+LSAC++  +L LAE+A K ++ELEP DD
Sbjct: 397 EHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDD 439


>emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
          Length = 768

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/103 (64%), Positives = 81/103 (78%)
 Frame = -2

Query: 310 EITFLSVLSACGHGGLIREGQSLFDMMVHQYGFKPTIKHYGCMVDLLCRGGHLDEALELI 131
           E+T LSVLSAC H GL+ EG+SLF  MV  +G KP I+HYGCMVDLL R G L EA ELI
Sbjct: 588 EVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELI 647

Query: 130 ERMPLEPDAVIWRSVLSACMIKRDLQLAEIAAKRVLELEPYDD 2
           E MP++PD+VIWRS+LSAC++  +L LAE+A K ++ELEP DD
Sbjct: 648 EHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDD 690


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512069|gb|AES93692.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  126 bits (317), Expect = 2e-27
 Identities = 55/102 (53%), Positives = 74/102 (72%)
 Frame = -2

Query: 307 ITFLSVLSACGHGGLIREGQSLFDMMVHQYGFKPTIKHYGCMVDLLCRGGHLDEALELIE 128
           +TF+ VL ACGH GL+ EG+ LF  M++++G  PT +HYGCMVDL CR   L +A+ELIE
Sbjct: 456 VTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIE 515

Query: 127 RMPLEPDAVIWRSVLSACMIKRDLQLAEIAAKRVLELEPYDD 2
            MP  P+ +IW S++SAC +  + +L E AAKR+LELEP  D
Sbjct: 516 TMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHD 557


>ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/100 (54%), Positives = 77/100 (77%)
 Frame = -2

Query: 310 EITFLSVLSACGHGGLIREGQSLFDMMVHQYGFKPTIKHYGCMVDLLCRGGHLDEALELI 131
           EIT++ VL AC H G++ +GQS F  M  Q+G KP + HYGCMVDLL R G L+EA E+I
Sbjct: 441 EITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVI 500

Query: 130 ERMPLEPDAVIWRSVLSACMIKRDLQLAEIAAKRVLELEP 11
             MP++P++++W S+L AC + +++QLAE+AAK++LELEP
Sbjct: 501 VNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEP 540


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