BLASTX nr result

ID: Atractylodes21_contig00045290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045290
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26044.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   131   5e-29
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   123   2e-26
ref|XP_003575628.1| PREDICTED: condensin-2 complex subunit D3-li...   117   1e-24

>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  131 bits (330), Expect = 5e-29
 Identities = 72/110 (65%), Positives = 80/110 (72%), Gaps = 11/110 (10%)
 Frame = +1

Query: 1   ACSDQLVSIRKAAISALSETFRKFHDDNVTKEWLHSVPRLITDNESSIQEECENLFLELV 180
           ACSD LVSIRKAAISALSE F+ F D NVT EWLHS+PRLITDNESSIQEECENLFLELV
Sbjct: 449 ACSDPLVSIRKAAISALSEAFKTFPDGNVTTEWLHSIPRLITDNESSIQEECENLFLELV 508

Query: 181 LDRISRAGS-----------DVHDSIGRTGRDHGLLFSDGVLGLLKEVCD 297
           LDR+SRAGS           D++        +  LLF  GVL LLKE+C+
Sbjct: 509 LDRVSRAGSTVSAHKKLVCNDLNAKTKSLEMEIELLFPGGVLVLLKEICN 558


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  131 bits (330), Expect = 5e-29
 Identities = 72/110 (65%), Positives = 80/110 (72%), Gaps = 11/110 (10%)
 Frame = +1

Query: 1   ACSDQLVSIRKAAISALSETFRKFHDDNVTKEWLHSVPRLITDNESSIQEECENLFLELV 180
           ACSD LVSIRKAAISALSE F+ F D NVT EWLHS+PRLITDNESSIQEECENLFLELV
Sbjct: 490 ACSDPLVSIRKAAISALSEAFKTFPDGNVTTEWLHSIPRLITDNESSIQEECENLFLELV 549

Query: 181 LDRISRAGS-----------DVHDSIGRTGRDHGLLFSDGVLGLLKEVCD 297
           LDR+SRAGS           D++        +  LLF  GVL LLKE+C+
Sbjct: 550 LDRVSRAGSTVSAHKKLVCNDLNAKTKSLEMEIELLFPGGVLVLLKEICN 599


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
           predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  129 bits (323), Expect = 3e-28
 Identities = 73/110 (66%), Positives = 81/110 (73%), Gaps = 11/110 (10%)
 Frame = +1

Query: 1   ACSDQLVSIRKAAISALSETFRKFHDDNVTKEWLHSVPRLITDNESSIQEECENLFLELV 180
           ACSD LVSIRKAAISALSE FR F D++V  EWLHSVPRLITDNESSIQEECENLF+ELV
Sbjct: 408 ACSDPLVSIRKAAISALSEAFRTFSDESVIMEWLHSVPRLITDNESSIQEECENLFMELV 467

Query: 181 LDRISRAG-----------SDVHDSIGRTGRDHGLLFSDGVLGLLKEVCD 297
           LDRISRAG           SD +       R+ GLLF  G+L LLKE+C+
Sbjct: 468 LDRISRAGPEGTIRNQTTFSDSNVKAKDIEREIGLLF-PGILVLLKEICN 516


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
           condensin, putative [Ricinus communis]
          Length = 1313

 Score =  123 bits (308), Expect = 2e-26
 Identities = 68/104 (65%), Positives = 79/104 (75%), Gaps = 5/104 (4%)
 Frame = +1

Query: 1   ACSDQLVSIRKAAISALSETFRKFHDDNVTKEWLHSVPRLITDNESSIQEECENLFLELV 180
           ACSD L+SIRKAAISALSE  R F D+ V  EWLHSVPRLITDNESS+QEECENLFLELV
Sbjct: 453 ACSDPLISIRKAAISALSEALRMFPDEIVITEWLHSVPRLITDNESSMQEECENLFLELV 512

Query: 181 LDRISRAGS----DVHDSIGRTG-RDHGLLFSDGVLGLLKEVCD 297
           LDRISRAGS    D   +  R+  ++  +   +GVL LLKE+C+
Sbjct: 513 LDRISRAGSPGTLDKESTSFRSNVKEKDIEIPEGVLILLKEICN 556


>ref|XP_003575628.1| PREDICTED: condensin-2 complex subunit D3-like [Brachypodium
           distachyon]
          Length = 1264

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/99 (60%), Positives = 73/99 (73%)
 Frame = +1

Query: 1   ACSDQLVSIRKAAISALSETFRKFHDDNVTKEWLHSVPRLITDNESSIQEECENLFLELV 180
           ACSD LVSIRKAA++A+SE FRKF D+ VTKEWL +VP L+TD+ESSIQEECEN FLELV
Sbjct: 446 ACSDPLVSIRKAALAAISEVFRKFPDERVTKEWLQAVPSLVTDSESSIQEECENFFLELV 505

Query: 181 LDRISRAGSDVHDSIGRTGRDHGLLFSDGVLGLLKEVCD 297
           L+R+ RA +   D       D   +F +G L LLK +CD
Sbjct: 506 LNRVCRAANSHLDDDSVNLED---VFPEGTLDLLKSICD 541


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