BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045184
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...    84   1e-14
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...    82   3e-14
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...    79   3e-13
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    79   4e-13
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]    79   4e-13

>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +3

Query: 3   ENQLVDKQSGQNLLSLSHDSLTAAHLILEDGVFFNRPQLQQLQMFCRHQQPELPAIMKKS 182
           + QL+D Q+GQNLLSLSHDSLTAAHLILE GVF +R Q+QQLQMFC  +Q  + AI+K  
Sbjct: 154 KQQLLDGQNGQNLLSLSHDSLTAAHLILEPGVFLDRFQMQQLQMFC-PRQLGMTAIVK-- 210

Query: 183 KDSPLELSAVMSNSYFWTGRQLF 251
                   A   N  +WTG+QLF
Sbjct: 211 --------APPGNICYWTGKQLF 225


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/81 (56%), Positives = 56/81 (69%)
 Frame = +3

Query: 9   QLVDKQSGQNLLSLSHDSLTAAHLILEDGVFFNRPQLQQLQMFCRHQQPELPAIMKKSKD 188
           QLV+ QSGQNLLSLS DSLTAAHLI +DGVF N+P++QQLQMF     P LPAI++ +  
Sbjct: 156 QLVNGQSGQNLLSLSQDSLTAAHLISQDGVFLNKPEMQQLQMFSA-WIPMLPAIIQSTS- 213

Query: 189 SPLELSAVMSNSYFWTGRQLF 251
                      + FWTG+QLF
Sbjct: 214 ---------RETSFWTGKQLF 225


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1687

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/83 (53%), Positives = 53/83 (63%)
 Frame = +3

Query: 3   ENQLVDKQSGQNLLSLSHDSLTAAHLILEDGVFFNRPQLQQLQMFCRHQQPELPAIMKKS 182
           + QL++ QSG NLLSLS DSLTAAHL+LEDGV FN  Q+QQL+M C            K 
Sbjct: 640 DRQLINGQSGGNLLSLSQDSLTAAHLLLEDGVGFNIYQVQQLEMLC-----------NKE 688

Query: 183 KDSPLELSAVMSNSYFWTGRQLF 251
             SP    A  SN+ FW+G+QLF
Sbjct: 689 LTSPAIFKAPSSNTPFWSGKQLF 711


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/81 (51%), Positives = 58/81 (71%)
 Frame = +3

Query: 9   QLVDKQSGQNLLSLSHDSLTAAHLILEDGVFFNRPQLQQLQMFCRHQQPELPAIMKKSKD 188
           QL+++QSG+NLLSLS DSL+AAHL++EDGV  N  Q+QQL+MFC +Q  + PAI+K    
Sbjct: 511 QLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPYQL-QSPAIIK---- 565

Query: 189 SPLELSAVMSNSYFWTGRQLF 251
                 A + ++  WTG+QLF
Sbjct: 566 ------APLLDTQVWTGKQLF 580


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/81 (51%), Positives = 58/81 (71%)
 Frame = +3

Query: 9   QLVDKQSGQNLLSLSHDSLTAAHLILEDGVFFNRPQLQQLQMFCRHQQPELPAIMKKSKD 188
           QL+++QSG+NLLSLS DSL+AAHL++EDGV  N  Q+QQL+MFC +Q  + PAI+K    
Sbjct: 481 QLINRQSGRNLLSLSQDSLSAAHLVMEDGVLLNLFQMQQLEMFCPYQL-QSPAIIK---- 535

Query: 189 SPLELSAVMSNSYFWTGRQLF 251
                 A + ++  WTG+QLF
Sbjct: 536 ------APLLDTQVWTGKQLF 550