BLASTX nr result

ID: Atractylodes21_contig00045063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045063
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95823.1| retrotransposon protein, putative, unclassified [...   125   4e-27
ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 ...   124   8e-27
ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787 [S...   124   8e-27
ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427 [S...   124   8e-27
ref|XP_002438095.1| hypothetical protein SORBIDRAFT_10g007953 [S...   124   1e-26

>gb|AAX95823.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77550348|gb|ABA93145.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 197

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/88 (67%), Positives = 70/88 (79%)
 Frame = -3

Query: 264 GMSEVKACATPVDTSTKLGATDGNLLPDGTLYRQLAGALQYLTFTRPDITYAVQQVCLFM 85
           GM E K C+TPVDT +K+ ++DG+ + D T YR LAG LQYLTFTRPDI+YAVQQVCL M
Sbjct: 71  GMLECKPCSTPVDTCSKMSSSDGSPVADPTDYRSLAGVLQYLTFTRPDISYAVQQVCLHM 130

Query: 84  HAPREPHFQFLKRILRYLSGTIDLGLQL 1
           H PREPH   LKRILRY+ GT+DLGL +
Sbjct: 131 HDPREPHLAALKRILRYIRGTLDLGLHI 158


>ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 [Sorghum bicolor]
            gi|241947124|gb|EES20269.1| hypothetical protein
            SORBIDRAFT_0139s002040 [Sorghum bicolor]
          Length = 1822

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/88 (67%), Positives = 67/88 (76%)
 Frame = -3

Query: 264  GMSEVKACATPVDTSTKLGATDGNLLPDGTLYRQLAGALQYLTFTRPDITYAVQQVCLFM 85
            GM++ K C+TPVDT  KL   +G  + D T YR LAGALQYLTFTRPDITYAVQQ+CL M
Sbjct: 1572 GMTDCKPCSTPVDTQGKLSEAEGTPVTDPTAYRSLAGALQYLTFTRPDITYAVQQICLHM 1631

Query: 84   HAPREPHFQFLKRILRYLSGTIDLGLQL 1
            H PREPH   LKRILRYL G++D GL L
Sbjct: 1632 HDPREPHLTALKRILRYLRGSVDFGLLL 1659


>ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787 [Sorghum bicolor]
            gi|241928093|gb|EES01238.1| hypothetical protein
            SORBIDRAFT_03g030787 [Sorghum bicolor]
          Length = 1567

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/88 (67%), Positives = 67/88 (76%)
 Frame = -3

Query: 264  GMSEVKACATPVDTSTKLGATDGNLLPDGTLYRQLAGALQYLTFTRPDITYAVQQVCLFM 85
            GM++ K C+TPVDT  KL   +G  + D T YR LAGALQYLTFTRPDITYAVQQ+CL M
Sbjct: 1317 GMTDCKPCSTPVDTQGKLSEAEGTPVTDPTAYRSLAGALQYLTFTRPDITYAVQQICLHM 1376

Query: 84   HAPREPHFQFLKRILRYLSGTIDLGLQL 1
            H PREPH   LKRILRYL G++D GL L
Sbjct: 1377 HDPREPHLTALKRILRYLRGSVDFGLLL 1404


>ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427 [Sorghum bicolor]
            gi|241923573|gb|EER96717.1| hypothetical protein
            SORBIDRAFT_02g024427 [Sorghum bicolor]
          Length = 1575

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/88 (67%), Positives = 67/88 (76%)
 Frame = -3

Query: 264  GMSEVKACATPVDTSTKLGATDGNLLPDGTLYRQLAGALQYLTFTRPDITYAVQQVCLFM 85
            GM++ K C+TPVDT  KL   +G  + D T YR LAGALQYLTFTRPDITYAVQQ+CL M
Sbjct: 1325 GMTDCKPCSTPVDTQGKLSEAEGTPVTDPTAYRSLAGALQYLTFTRPDITYAVQQICLHM 1384

Query: 84   HAPREPHFQFLKRILRYLSGTIDLGLQL 1
            H PREPH   LKRILRYL G++D GL L
Sbjct: 1385 HDPREPHLTALKRILRYLRGSVDFGLLL 1412


>ref|XP_002438095.1| hypothetical protein SORBIDRAFT_10g007953 [Sorghum bicolor]
            gi|241916318|gb|EER89462.1| hypothetical protein
            SORBIDRAFT_10g007953 [Sorghum bicolor]
          Length = 1330

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/88 (67%), Positives = 67/88 (76%)
 Frame = -3

Query: 264  GMSEVKACATPVDTSTKLGATDGNLLPDGTLYRQLAGALQYLTFTRPDITYAVQQVCLFM 85
            GM++ K C+TPVDT  K+   +G  + D T YR LAGALQYLTFTRPDITYAVQQ+CL M
Sbjct: 1080 GMTDCKPCSTPVDTQGKISEAEGIPVTDPTAYRSLAGALQYLTFTRPDITYAVQQICLHM 1139

Query: 84   HAPREPHFQFLKRILRYLSGTIDLGLQL 1
            H PREPH   LKRILRYL GT+D GL L
Sbjct: 1140 HDPREPHLAALKRILRYLRGTVDFGLLL 1167


Top