BLASTX nr result

ID: Atractylodes21_contig00045054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045054
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]   192   2e-47
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   190   9e-47
ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-l...   190   1e-46
ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-l...   189   3e-46
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   189   3e-46

>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score =  192 bits (488), Expect = 2e-47
 Identities = 92/115 (80%), Positives = 106/115 (92%)
 Frame = -3

Query: 346 GLNGKYKMMASGPLQIKYADGELERLEHKLFIGMLPKNVSEGEVSALFSQYGTLNALQIL 167
           GL   +++ AS PLQ+KYADGELERLEHKLF+GMLPKNVSE EVS+LFS+YGT+  LQIL
Sbjct: 130 GLRLAFQVSASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSSLFSKYGTIKDLQIL 189

Query: 166 RGSQQTSKGCAFVKYDTKEQAVAAIEGLNGKHKMEGSTVPLVVKWADTEKERQAR 2
           RGSQQTSKGCAF+KY+TKEQA+AA+E +NGKHKMEGS+VPLVVKWADTEKERQAR
Sbjct: 190 RGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQAR 244


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  190 bits (483), Expect = 9e-47
 Identities = 93/126 (73%), Positives = 111/126 (88%), Gaps = 1/126 (0%)
 Frame = -3

Query: 376 TKEQAVAAIEGLNGKYKMM-ASGPLQIKYADGELERLEHKLFIGMLPKNVSEGEVSALFS 200
           ++++A  A+   + K  +  AS PLQ+KYADGELERLEHKLF+GMLPKNVSE EVS+LFS
Sbjct: 65  SRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSSLFS 124

Query: 199 QYGTLNALQILRGSQQTSKGCAFVKYDTKEQAVAAIEGLNGKHKMEGSTVPLVVKWADTE 20
           +YGT+  LQILRGSQQTSKGCAF+KY+TKEQA+AA+E +NGKHKMEGS+VPLVVKWADTE
Sbjct: 125 KYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184

Query: 19  KERQAR 2
           KERQAR
Sbjct: 185 KERQAR 190



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/85 (34%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = -3

Query: 262 KLFIGMLPKNVSEGEVSALFSQYGTLNALQILRG-SQQTSKGCAFVKYDTKEQAVAAIEG 86
           KLF+G +PKN++E ++ A+F ++  ++ + I++  + + S+GC FV   ++++A  A+  
Sbjct: 16  KLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNA 75

Query: 85  LNGKHKMEGSTVPLVVKWADTEKER 11
            + K  + G++ PL VK+AD E ER
Sbjct: 76  CHNKRTLPGASSPLQVKYADGELER 100


>ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
          Length = 431

 Score =  190 bits (482), Expect = 1e-46
 Identities = 94/126 (74%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
 Frame = -3

Query: 376 TKEQAVAAIEGLNGKYKMM-ASGPLQIKYADGELERLEHKLFIGMLPKNVSEGEVSALFS 200
           ++E+A  A+   + K  +  AS PLQ+KYADGELERLEHKLFIGMLPKNVSE E+SALFS
Sbjct: 65  SREEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFS 124

Query: 199 QYGTLNALQILRGSQQTSKGCAFVKYDTKEQAVAAIEGLNGKHKMEGSTVPLVVKWADTE 20
           +YGT+  LQILRGSQQTSKGCAF+KY+TKEQA+ A+E +NGKHKMEGS+VPLVVKWADTE
Sbjct: 125 KYGTIKDLQILRGSQQTSKGCAFLKYETKEQALTALEAINGKHKMEGSSVPLVVKWADTE 184

Query: 19  KERQAR 2
           KERQAR
Sbjct: 185 KERQAR 190



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/85 (35%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = -3

Query: 262 KLFIGMLPKNVSEGEVSALFSQYGTLNALQILRG-SQQTSKGCAFVKYDTKEQAVAAIEG 86
           KLF+G +PK+++E E+ A+F ++  ++ + I++  + + S+GC FV   ++E+A  A+  
Sbjct: 16  KLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVNA 75

Query: 85  LNGKHKMEGSTVPLVVKWADTEKER 11
            + K  + G++ PL VK+AD E ER
Sbjct: 76  CHNKRTLPGASSPLQVKYADGELER 100


>ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
          Length = 429

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/126 (74%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
 Frame = -3

Query: 376 TKEQAVAAIEGLNGKYKMM-ASGPLQIKYADGELERLEHKLFIGMLPKNVSEGEVSALFS 200
           ++E+A  A+   + K  +  AS PLQ+KYADGELERLEHKLFIGMLPKNVSE E+SALFS
Sbjct: 63  SREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFS 122

Query: 199 QYGTLNALQILRGSQQTSKGCAFVKYDTKEQAVAAIEGLNGKHKMEGSTVPLVVKWADTE 20
           +YGT+  LQILRGSQQTSKGCAF+KY+TKEQA+AA+E +NGKHKME S+VPLVVKWADTE
Sbjct: 123 KYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEDSSVPLVVKWADTE 182

Query: 19  KERQAR 2
           KERQAR
Sbjct: 183 KERQAR 188



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/85 (34%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = -3

Query: 262 KLFIGMLPKNVSEGEVSALFSQYGTLNALQILRG-SQQTSKGCAFVKYDTKEQAVAAIEG 86
           KLF+G +PK+++E E+ A+F ++  ++ + I++  + + S+GC F+   ++E+A  A+  
Sbjct: 14  KLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFLICPSREEADKAVNA 73

Query: 85  LNGKHKMEGSTVPLVVKWADTEKER 11
            + K  + G++ PL VK+AD E ER
Sbjct: 74  CHNKKTLPGASSPLQVKYADGELER 98


>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  189 bits (479), Expect = 3e-46
 Identities = 93/126 (73%), Positives = 109/126 (86%), Gaps = 1/126 (0%)
 Frame = -3

Query: 376 TKEQAVAAIEGLNGKYKMM-ASGPLQIKYADGELERLEHKLFIGMLPKNVSEGEVSALFS 200
           ++++A  A+   + K  +  AS PLQ+KYADGELERLEHKLF+GMLPKNVSE EVS LFS
Sbjct: 65  SRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSELFS 124

Query: 199 QYGTLNALQILRGSQQTSKGCAFVKYDTKEQAVAAIEGLNGKHKMEGSTVPLVVKWADTE 20
            YGT+  LQILRGSQQTSKGCAF+KY+TKEQA+AA+E +NGKHKMEGS+VPLVVKWADTE
Sbjct: 125 TYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184

Query: 19  KERQAR 2
           KERQAR
Sbjct: 185 KERQAR 190



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/85 (32%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = -3

Query: 262 KLFIGMLPKNVSEGEVSALFSQYGTLNALQILRG-SQQTSKGCAFVKYDTKEQAVAAIEG 86
           KLF+G +PK+++E ++ A+F ++  ++ + I++  + + S+GC FV   ++++A  A+  
Sbjct: 16  KLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75

Query: 85  LNGKHKMEGSTVPLVVKWADTEKER 11
            + K  + G++ PL VK+AD E ER
Sbjct: 76  CHNKKTLPGASSPLQVKYADGELER 100


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