BLASTX nr result

ID: Atractylodes21_contig00045053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045053
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81277.1| hypothetical protein VITISV_007829 [Vitis vinifera]   184   9e-45
ref|XP_002267479.1| PREDICTED: protein BREVIS RADIX [Vitis vinif...   180   1e-43
emb|CBI37411.3| unnamed protein product [Vitis vinifera]              178   4e-43
ref|XP_002519871.1| Ran GTPase binding protein, putative [Ricinu...   176   2e-42
ref|XP_004146121.1| PREDICTED: protein BREVIS RADIX-like [Cucumi...   162   3e-38

>emb|CAN81277.1| hypothetical protein VITISV_007829 [Vitis vinifera]
          Length = 424

 Score =  184 bits (466), Expect = 9e-45
 Identities = 97/150 (64%), Positives = 110/150 (73%), Gaps = 26/150 (17%)
 Frame = -2

Query: 373 LKRIRFNREMFDKWQAQRWWGENYDRIMELYNVQRFNCQALDTPSRSEDGRDSTYSRLGS 194
           LKRIRF+REMF+KWQAQRWWGENYDRIMELYNVQRFN QAL TP RSED RDS+YSR+GS
Sbjct: 224 LKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSEDERDSSYSRMGS 283

Query: 193 VKDSPMMNPM------RNYYK-----------PPEQGGNHHYNAGV---------GGAAS 92
            ++SPM   +      RNYYK           P +Q G+H YNAG          G  +S
Sbjct: 284 ARESPMTPSLNKEWIPRNYYKPSGSKGYFPSEPSDQYGSHQYNAGSSAYGTGGPRGETSS 343

Query: 91  MDASRTTTSSRDEASVSISNASDMDSEWIE 2
           MDASRTTTSSRDEASVSISNASDM++EW+E
Sbjct: 344 MDASRTTTSSRDEASVSISNASDMETEWVE 373


>ref|XP_002267479.1| PREDICTED: protein BREVIS RADIX [Vitis vinifera]
          Length = 360

 Score =  180 bits (456), Expect = 1e-43
 Identities = 96/141 (68%), Positives = 107/141 (75%), Gaps = 17/141 (12%)
 Frame = -2

Query: 373 LKRIRFNREMFDKWQAQRWWGENYDRIMELYNVQRFNCQALDTPSRSED--GRDSTYSRL 200
           LKRIRF+REMF+KWQAQRWWGENYDRIMELYNVQRFN QAL TP RSED   RDS+YSR+
Sbjct: 170 LKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSEDEVNRDSSYSRM 229

Query: 199 GSVKDSPMMNPM------RNYYKPPEQGGNHHYNAGV---------GGAASMDASRTTTS 65
           GS ++SPM   +      RNYYKP    G H YNAG          G  +SMDASRTTTS
Sbjct: 230 GSARESPMTPSLNKEWIPRNYYKPSGSKG-HQYNAGSSAYGTGGPRGETSSMDASRTTTS 288

Query: 64  SRDEASVSISNASDMDSEWIE 2
           SRDEASVSISNASDM++EW+E
Sbjct: 289 SRDEASVSISNASDMETEWVE 309


>emb|CBI37411.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  178 bits (452), Expect = 4e-43
 Identities = 91/130 (70%), Positives = 102/130 (78%), Gaps = 6/130 (4%)
 Frame = -2

Query: 373 LKRIRFNREMFDKWQAQRWWGENYDRIMELYNVQRFNCQALDTPSRSEDGRDSTYSRLGS 194
           LKRIRF+REMF+KWQAQRWWGENYDRIMELYNVQRFN QAL TP RSED RDS+YSR+GS
Sbjct: 170 LKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSEDERDSSYSRMGS 229

Query: 193 VKDSPMMNPM------RNYYKPPEQGGNHHYNAGVGGAASMDASRTTTSSRDEASVSISN 32
            ++SPM   +      RNYYKP   G         G  +SMDASRTTTSSRDEASVSISN
Sbjct: 230 ARESPMTPSLNKEWIPRNYYKPSGSGPR-------GETSSMDASRTTTSSRDEASVSISN 282

Query: 31  ASDMDSEWIE 2
           ASDM++EW+E
Sbjct: 283 ASDMETEWVE 292


>ref|XP_002519871.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223540917|gb|EEF42475.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 331

 Score =  176 bits (445), Expect = 2e-42
 Identities = 95/148 (64%), Positives = 108/148 (72%), Gaps = 24/148 (16%)
 Frame = -2

Query: 373 LKRIRFNREMFDKWQAQRWWGENYDRIMELYNVQRFNCQALDTPSRSED--GRDSTYSRL 200
           LKRIRF+REMF+KWQAQRWWGENYDRIMELYNVQRFN QAL+TP RSED   RDS YSR+
Sbjct: 133 LKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALNTPPRSEDEPHRDSCYSRM 192

Query: 199 GSVKDSPMMNPM--RNYYKPP-----------EQGGNHHYNAGVGG---------AASMD 86
           GS ++SPM      RN+YKP            EQ G+ HY+ G  G         AASMD
Sbjct: 193 GSARESPMAPAYTPRNHYKPSGSKGYFPSDVMEQVGSQHYHGGSSGYGTGGPKVEAASMD 252

Query: 85  ASRTTTSSRDEASVSISNASDMDSEWIE 2
           ASRTTTSSRDE SVS+SNASD++SEW+E
Sbjct: 253 ASRTTTSSRDEPSVSVSNASDIESEWVE 280


>ref|XP_004146121.1| PREDICTED: protein BREVIS RADIX-like [Cucumis sativus]
           gi|449520457|ref|XP_004167250.1| PREDICTED: protein
           BREVIS RADIX-like [Cucumis sativus]
          Length = 361

 Score =  162 bits (409), Expect = 3e-38
 Identities = 86/147 (58%), Positives = 105/147 (71%), Gaps = 23/147 (15%)
 Frame = -2

Query: 373 LKRIRFNREMFDKWQAQRWWGENYDRIMELYNVQRFNCQALDTPSRSEDGRDSTYSRLGS 194
           LKRIRFNREMF+KWQAQRWWGENYDRI ELYNVQRFN QAL TP R+EDGRDS+YS++G 
Sbjct: 166 LKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKVG- 224

Query: 193 VKDSPMMNPMRNY----YKPPEQGG---NHHYNAG----------------VGGAASMDA 83
            +DSPM +  +++    YKP    G   + HY+ G                 G  +SM+A
Sbjct: 225 -RDSPMTSANKDWTPRNYKPSGSKGFPSDQHYDHGNSHPYAGSSAYPAGSVKGDMSSMEA 283

Query: 82  SRTTTSSRDEASVSISNASDMDSEWIE 2
           SRTTTSSRDE S+SISNASD+++EW+E
Sbjct: 284 SRTTTSSRDEPSISISNASDIEAEWVE 310


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