BLASTX nr result

ID: Atractylodes21_contig00045044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00045044
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    77   1e-12
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    77   2e-12
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    69   5e-10
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]    69   5e-10
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]    68   7e-10

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/92 (40%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
 Frame = -1

Query: 295 GNTGTGEEKAASSNVTRTN-------PSGTKCFSNFRRLTDKELQEKRQQGLCYRCDEKY 137
           G+  + +  A +SN ++T+       P  ++ F   RRLT+KELQEKR +GLC++CDEK+
Sbjct: 365 GSNASTKSWAINSNASQTSVNNAKPPPLSSRGFGEMRRLTEKELQEKRAKGLCFKCDEKW 424

Query: 136 APGHRCKKKELSVVLVQEAEGEVEEMGLDDAE 41
             GH+C++KELSV+ +++ E +  E  L  +E
Sbjct: 425 GVGHQCRRKELSVLFMEDNEEDELEGALSGSE 456


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/64 (57%), Positives = 45/64 (70%)
 Frame = -1

Query: 262 SSNVTRTNPSGTKCFSNFRRLTDKELQEKRQQGLCYRCDEKYAPGHRCKKKELSVVLVQE 83
           S N  +T     K F   RRL++KELQ KR+ GLC+RCDEK+A GHRCKKKELS++L  E
Sbjct: 317 SPNKPKTTLPIAKPFGEIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHE 376

Query: 82  AEGE 71
            E E
Sbjct: 377 EEEE 380


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/69 (47%), Positives = 51/69 (73%)
 Frame = -1

Query: 250 TRTNPSGTKCFSNFRRLTDKELQEKRQQGLCYRCDEKYAPGHRCKKKELSVVLVQEAEGE 71
           T+T+    + +   RRL++KELQ KR++GLC+RCD+K++ GHRC KKELSV+L  + + E
Sbjct: 278 TKTHIPIARPYGEIRRLSEKELQHKRERGLCFRCDDKWSVGHRC-KKELSVLLSCKEDEE 336

Query: 70  VEEMGLDDA 44
           +E   L++A
Sbjct: 337 IEYGELENA 345


>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/83 (39%), Positives = 55/83 (66%), Gaps = 8/83 (9%)
 Frame = -1

Query: 262 SSNVTRTNPSGTKCFSNFRRLTDKELQEKRQQGLCYRCDEKYAPGHRCKKKELSVVLVQ- 86
           S+N+ +TNP  T    N R  ++++L E+R +GLC+ CDEK+ PGH+CK+K+L V+ +Q 
Sbjct: 341 STNIPKTNPGITT--RNHRNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQV 398

Query: 85  EAEGE-------VEEMGLDDAEL 38
           E +GE       +E +G +D ++
Sbjct: 399 ETDGEGPEGNLQMEGLGKEDEQI 421


>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
          Length = 1412

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = -1

Query: 262 SSNVTRTNPSGTKCFSNFRRLTDKELQEKRQQGLCYRCDEKYAPGHRCKKKELSVVLVQ- 86
           S+N+ +TNP  T    N R  ++++L E+R +GLC+ CDEK+ PGH+CK+K+L V+ +Q 
Sbjct: 289 STNIPKTNPGITT--RNHRNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQV 346

Query: 85  EAEGEVEEMGL 53
           E +GE  E  L
Sbjct: 347 ETDGEGPEGNL 357


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